Protein Concepts Dictionary

Tableau information

Concept source:  d1ba1a2  amino acid (a.a.) range (LYS220)(SER381)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHHEEHHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS220)  (ASP225) E1
	  (GLY230)  (LYS248) H2
	  (ARG258)  (LEU274) H3
	  (THR278)  (ASP285) E4
	  (ASP292)  (THR298) E5
	  (THR298)  (ASN306) H6
	  (ASN306)  (GLY312) H7
	  (LEU314)  (LYS325) H8
	  (HIS332)  (GLY338) E9
	  (GLY338)  (PRO344) H10
	  (PRO344)  (ASN355) H11
	  (LYS357)  (ILE363) E12
	  (ALA368)  (SER381) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2       16.0°   H2                                                                                  
H3      133.1°  117.3°   H3                                                                           
E4      -45.7°  -60.5°  155.0°   E4                                                                    
E5      138.4°  125.1°  -32.6°  170.7°   E5                                                             
H6      102.1°  112.1° -113.7°   88.0°   82.8°   H6                                                      
H7      166.4°  171.4°  -59.5°  126.2°  -47.5°   65.0°   H7                                               
H8      156.5°  162.9°  -66.5°  123.9°  -48.3°  -54.5°   10.9°   H8                                        
E9      -35.3°  -48.2° -145.1°   15.0° -173.1°  100.9°  139.3°  138.5°   E9                                 
H10      78.9°   63.0°   55.4° -121.2°  -66.7° -128.1° -111.8° -114.9° -106.6°   H10                         
H11     138.4°  130.4°  -51.4° -151.3°   19.5°  -63.3°  -41.0°  -37.1°  163.3°  -81.7°   H11                  
E12     -76.7°  -85.3° -115.0°   42.0° -140.7°  110.4°  103.3°  108.7°  -43.4° -120.0°  144.2°   E12           
H13    -141.5° -152.3°  -76.5°   96.5°  -80.0°  -79.8°   36.3°   43.0° -106.2°  130.3°  -77.2°   67.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qfua2 :   (GLN265)  (SER426)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3gl1a2 :   (LYS223)  (LEU383)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3jxua2 :   (ILE216)  (ALA368)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4io8a2 :   (ILE216)  (GLU367)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ngja2 :   (ILE216)  (SER381)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3iuca2 :   (VAL245)  (SER406)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3i33a2 :   (LYS223)  (ILE384)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qqma2 :   (LYS220)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3l6qa2 :   (ILE232)  (LEU397)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
 d2e88a2 :   (LYS220)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ba1a2 :   (LYS220)  (SER381)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3qmla2 :   (VAL261)  (ALA413)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2qwna2 :   (LYS220)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1yuwa3 :   (LYS220)  (SER381)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3d2eb2 :   (ILE216)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Human (Homo sapiens) [TaxId: 9606]
 d1qqna2 :   (LYS220)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1atsa2 :   (ILE216)  (LEU380)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3fe1a2 :   (VAL218)  (ALA370)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ngea2 :   (ILE216)  (SER381)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55