Protein Concepts Dictionary

Tableau information

Concept source:  d1blsa_  amino acid (a.a.) range (GLY222)(LEU360)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY222)  (ASN226) E1
	  (ASN226)  (PRO240) H2
	  (ASP245)  (SER257) H3
	  (TYR259)  (GLY263) E4
	  (SER264)  (LEU269) E5
	  (GLY270)  (ASN275) E6
	  (ALA280)  (ASP288) H7
	  (ASP288)  (ALA294) H8
	  (PRO297)  (PRO303) E9
	  (ALA310)  (GLY320) E10
	  (GLY323)  (ILE329) E11
	  (GLN333)  (ASN341) E12
	  (PRO345)  (LEU360) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2       98.3°   H2                                                                                  
H3     -109.9°  -82.3°   H3                                                                           
E4      -84.9°  -97.6°  -27.8°   E4                                                                    
E5      100.1°  107.3°  146.9°  153.4°   E5                                                             
E6      -63.3°  -55.8°  -60.6°  -54.1°  150.5°   E6                                                      
H7     -139.1°  119.9°   90.5°  102.6°  -57.0°  150.7°   H7                                               
H8      129.8°   56.7°  108.5°  136.1°  -57.8°  112.5°  -70.1°   H8                                        
E9       70.1°   59.7°  140.8°  141.6°  -62.7°   88.1° -115.4°  -59.7°   E9                                 
E10    -111.7°  149.8°   89.9°   88.1°  -65.7°  141.6°  -30.7°  -99.4° -127.6°   E10                         
E11      68.4°  -30.4°  -97.3°  -99.4°  106.7°  -45.7°  145.8°   75.9°   44.8°  172.4°   E11                  
E12    -111.2°  149.9°   82.5°   80.1°  -73.7°  133.8°  -34.7° -104.7° -135.5°   -8.0°  179.5°   E12           
H13      36.0°  -63.5° -111.2°  -98.1°  101.1°  -50.7°  158.1°   99.6°   45.2°  145.1°  -33.1°  146.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1blsa_ :   (GLY222)  (LEU360)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
 d1ga0a_ :   (GLY225)  (GLN364)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
 d1fswa_ :   (GLY222)  (ALA361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d1s6ra_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
 d4u0xb_ :   (GLY223)  (ILE357)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
 d1fr1a_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Citrobacter freundii [TaxId: 546]
 d3s4xa_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
 d3iwqb_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d1y54a_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Enterobacter cloacae [TaxId: 550]
 d1zc2a_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d1zc2b_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d3iwib_ :   (GLY225)  (GLN364)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d1rgya_ :   (GLY222)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Citrobacter freundii [TaxId: 546]
 d1fcmb_ :   (GLY219)  (GLN358)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d2zc7b_ :   (GLY222)  (LEU360)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3