Protein Concepts Dictionary

Tableau information

Concept source:  d2ax4a_  amino acid (a.a.) range (GLY52)(ASN224)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY52)   (THR58) E1
	   (GLY64)   (ALA80) H2
	   (PRO82)   (ASP87) E3
	   (ASP87)   (ARG97) H4
	  (SER102)  (GLY124) H5
	  (VAL126)  (PHE131) E6
	  (PHE135)  (GLY150) H7
	  (LEU151)  (PHE157) E8
	  (LEU162)  (ASP169) H9
	  (TYR174)  (GLY180) H10
	  (PHE185)  (SER190) H11
	  (GLU199)  (LYS203) E12
	  (THR208)  (ASN224) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      158.0°   H2                                                                                  
E3      -28.7° -167.7°   E3                                                                           
H4      -98.0°  102.8°  -69.4°   H4                                                                    
H5      150.5°   10.3°  175.9°  111.5°   H5                                                             
E6      -21.7° -170.6°   -7.0°  -76.4°  171.3°   E6                                                      
H7     -172.9°  -20.8°  155.7°   86.4°  -26.1°  162.5°   H7                                               
E8      -21.2°  136.8°  -48.6° -117.7°  129.9°  -41.7° -155.8°   E8                                        
H9      -89.0°   86.3°  -83.3°  -83.2°   92.8°  -84.3°   97.1°   84.3°   H9                                 
H10     -50.3°  151.5°   28.3°   52.8° -155.3°  -33.1°  130.9°  -71.5° -102.9°   H10                         
H11     -51.0°  142.7°   46.2°   74.8° -137.8°   46.5° -125.8°  -67.6° -129.2°  -29.4°   H11                  
E12     -39.9°  120.4°  -60.0° -120.7°  117.0°  -54.4°  141.2°  -23.6°   63.0°  -87.4°  -90.1°   E12           
H13     143.3°  -53.7°  128.0°   70.0°  -55.4°  132.8°  -33.8°  153.5° -122.2°   99.9°   92.4°  169.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ofwg_ :    (GLY49)  (ASP224)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ax4b_ :    (GLY49)  (ASN224)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xjqb3 :    (GLY49)  (ASP224)   [view usage] : c.37.1.4 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Adenosine-5'phosphosulfate kinase (APS kinase) |Adenosine-5'phosphosulfate kinase (APS kinase) |Human (Homo sapiens) [TaxId: 9606]
 d2ax4a_ :    (GLY52)  (ASN224)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1m7ha_ :    (LEU26)  (GLY204)   [view usage] : c.37.1.4 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Adenosine-5'phosphosulfate kinase (APS kinase) |Adenosine-5'phosphosulfate kinase (APS kinase) |Fungus (Penicillium chrysogenum) [TaxId: 5076]
 d1m7gc_ :    (GLY25)  (GLY204)   [view usage] : c.37.1.4 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Adenosine-5'phosphosulfate kinase (APS kinase) |Adenosine-5'phosphosulfate kinase (APS kinase) |Fungus (Penicillium chrysogenum) [TaxId: 5076]
 d1m7hc_ :    (LEU26)  (GLY204)   [view usage] : c.37.1.4 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Adenosine-5'phosphosulfate kinase (APS kinase) |Adenosine-5'phosphosulfate kinase (APS kinase) |Fungus (Penicillium chrysogenum) [TaxId: 5076]
 d2peya_ :    (CYS53)  (ASP224)   [view usage] : c.37.1.4 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Adenosine-5'phosphosulfate kinase (APS kinase) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1m7ga_ :    (GLY25)  (GLY204)   [view usage] : c.37.1.4 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Adenosine-5'phosphosulfate kinase (APS kinase) |Adenosine-5'phosphosulfate kinase (APS kinase) |Fungus (Penicillium chrysogenum) [TaxId: 5076]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37