Protein Concepts Dictionary

Tableau information

Concept source:  d2hmtb_  amino acid (a.a.) range (LYS7)(GLU139)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS7)   (GLY13) E1
	   (PHE17)   (GLY29) H2
	   (GLU31)   (ILE37) E3
	   (GLU39)   (TYR45) H4
	   (THR50)   (ILE54) E5
	   (GLU59)   (GLY67) H6
	   (GLY67)   (GLU72) H7
	   (GLU72)   (ILE78) E8
	   (ILE82)   (ASP96) H9
	   (PRO98)  (LYS103) E10
	  (ASN106)  (ILE116) H11
	  (ASP119)  (GLU125) E12
	  (GLU125)  (GLU139) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2     -151.1°   H2                                                                                  
E3      -21.1° -160.0°   E3                                                                           
H4      138.3°  -25.3°  159.1°   H4                                                                    
E5      -31.0° -158.5°  -10.0° -168.9°   E5                                                             
H6      147.3°   -5.5°  160.0°  -20.5°  161.3°   H6                                                      
H7     -126.7°   61.1° -137.7°   42.7° -139.9°   58.8°   H7                                               
E8      -12.0° -146.2°  -32.0°  128.2°  -41.7°  141.3° -115.3°   E8                                        
H9      154.4°   47.9°  133.5°  -66.6°  123.7°  -53.1°  -73.9°  165.1°   H9                                 
E10     -34.1°  127.5°  -54.4°  106.4°  -63.9°  122.1°   96.4°  -22.4° -170.3°   E10                         
H11     142.3°  -57.8°  121.5°  -78.2°  111.8°  -63.2°  -84.8°  153.5°  -12.2°  174.3°   H11                  
E12     -50.9°  107.7°  -72.0°   87.8°  -81.9°  102.3°   87.4°  -40.5°  154.3°  -19.9° -165.5°   E12           
H13    -117.5°   55.1° -136.6°   30.1° -144.6°  -50.6°   26.1° -105.6°   87.6°  -83.5°  -99.8°  -68.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1lsua_ :     (LYS7)  (GLU139)   [view usage] : c.2.1.9 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Potassium channel NAD-binding domain |Ktn bsu222 |Bacillus subtilis [TaxId: 1423]
 d2hmtb_ :     (LYS7)  (GLU139)   [view usage] : c.2.1.9 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Potassium channel NAD-binding domain |Ktn bsu222 |Bacillus subtilis [TaxId: 1423]
 d2hmta_ :     (GLN8)  (ASN143)   [view usage] : c.2.1.9 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Potassium channel NAD-binding domain |Ktn bsu222 |Bacillus subtilis [TaxId: 1423]
 d2hmwb_ :     (GLN8)  (LEU142)   [view usage] : c.2.1.9 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Potassium channel NAD-binding domain |Ktn bsu222 |Bacillus subtilis [TaxId: 1423]
 d2hmwa_ :     (GLN8)  (ASN140)   [view usage] : c.2.1.9 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Potassium channel NAD-binding domain |Ktn bsu222 |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2