Protein Concepts Dictionary

Tableau information

Concept source:  d4lipd_  amino acid (a.a.) range (PRO10)(ALA213)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO10)   (GLY16) E1
	   (ILE33)   (GLY41) H2
	   (THR43)   (LEU49) E3
	   (GLY62)   (ALA75) H4
	   (THR79)   (GLY85) E5
	   (GLY89)  (PRO101) H6
	  (SER106)  (GLY111) E7
	  (GLU118)  (TYR129) H8
	  (LEU134)  (LEU149) H9
	  (ALA160)  (THR168) H10
	  (ALA172)  (ASN178) H11
	  (CYS190)  (GLY200) E12
	  (GLY201)  (ALA213) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      170.4°   H2                                                                                  
E3      -29.0°  156.2°   E3                                                                           
H4      158.5°  -27.4°  151.3°   H4                                                                    
E5      -31.5°  141.7°  -60.5°  136.0°   E5                                                             
H6      130.7°  -51.2°  105.2°  -67.6° -153.3°   H6                                                      
E7      -27.0°  148.9°  -54.7°  135.4°   11.5° -156.9°   E7                                               
H8       34.9° -154.0°  -16.9°  136.7°   63.6° -110.0°   54.7°   H8                                        
H9      148.3°  -36.9° -147.3°  -10.1°  127.8°  -76.9°  126.0°  131.0°   H9                                 
H10     -97.5°   73.1°  110.3°  -96.5°  -82.8°   81.8°  -94.3° -126.5°  102.4°   H10                         
H11     148.5°  -33.5°  122.7°  -50.7° -162.3°   17.9° -172.5°  125.4°  -60.5°  -80.0°   H11                  
E12     138.7°  -48.9°  110.0°  -49.7°  168.6°   30.3°  157.5°  105.5°  -56.2°  107.4°   27.4°   E12           
E13     -44.9°  131.5°  -72.2°  118.5°  -18.8° -171.6°  -18.0°   70.0°  109.7°  -91.5° -164.6°  158.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4lipd_ :    (PRO10)  (ALA213)   [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase |Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]
 d1ex9a_ :     (PRO9)  (SER202)   [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase |Pseudomonas aeruginosa [TaxId: 287]
 d1hqda_ :    (PRO10)  (ALA213)   [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase |Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]
 d4hs9a_ :     (PRO6)  (ILE200)   [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase A |Proteus mirabilis [TaxId: 584]
 d1ys1x_ :    (PRO10)  (ALA213)   [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Burkholderia cepacia [TaxId: 292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69