Protein Concepts Dictionary

Tableau information

Concept source:  d1xu7b_  amino acid (a.a.) range (LYS36)(VAL203)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS36)   (GLY41) E1
	   (ILE46)   (GLY58) H2
	   (HIS60)   (ARG66) E3
	   (SER67)   (GLY82) H4
	   (ALA84)   (ALA90) E5
	   (ASP95)  (MET110) H6
	  (ASP114)  (ASN119) E7
	  (ILE133)  (PHE144) H8
	  (PHE144)  (ALA154) H9
	  (LEU155)  (SER161) H10
	  (ASN162)  (VAL168) E11
	  (SER170)  (VAL175) H12
	  (ALA181)  (VAL203) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2     -159.1°   H2                                                                                  
E3      -21.4° -163.0°   E3                                                                           
H4      140.7°  -27.4°  161.9°   H4                                                                    
E5      -38.2°  154.5°  -17.3°  177.9°   E5                                                             
H6      147.1°  -12.6°  159.3°  -20.8°  161.3°   H6                                                      
E7       -6.7°  154.5°  -28.1°  134.1°  -44.8°  142.0°   E7                                               
H8     -165.5°   10.1°  170.4°  -25.7°  155.6°  -19.5° -159.3°   H8                                        
H9      168.9°  -24.3°  149.1°  -48.0°  133.4°  -36.9°  173.4°  -22.3°   H9                                 
H10    -138.7°   35.4° -159.1°   11.8° -166.3°   31.7° -132.0°   30.4°  -51.6°   H10                         
E11     -12.1°  148.5°  -33.3°  128.7°  -50.3°  136.0°   -6.0°  153.5°  170.1°  127.6°   E11                  
H12      79.3° -118.3°   76.2° -108.2°   70.1° -124.3°   80.0° -108.3° -105.6°  -96.5°   84.2°   H12           
H13     159.2°  -40.5°  147.0°  -49.5°  130.6°  -51.0° -159.3°  -31.5°  -27.1°  -45.9° -161.4°  -80.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2irwa_ :    (VAL37)  (SER204)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
 d3dwfa1 :    (LYS36)  (PHE193)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Guinea pig (Cavia porcellus) [TaxId: 10141]
 d3byza_ :    (LYS36)  (PHE193)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
 d1xu7b_ :    (LYS36)  (VAL203)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
 d3dwfb_ :    (LYS36)  (PHE193)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Guinea pig (Cavia porcellus) [TaxId: 10141]
 d3d4nb_ :    (LYS36)  (ARG205)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
 d4wk6a_ :    (LYS10)  (VAL173)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Vibrio cholerae [TaxId: 592313]
 d3zn2a_ :     (SER2)  (LEU163)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 358]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2