Protein Concepts Dictionary

Tableau information

Concept source:  d1cz1a_  amino acid (a.a.) range (ARG129)(GLY382)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG129)  (LEU134) E1
	  (ASP159)  (LYS174) H2
	  (ILE185)  (LEU190) E3
	  (MET200)  (THR217) H4
	  (THR221)  (ASP227) E5
	  (VAL231)  (ASN237) H6
	  (ASN247)  (GLN256) E7
	  (SER259)  (ARG265) H8
	  (ILE267)  (GLU284) H9
	  (TRP287)  (ALA296) E10
	  (SER336)  (TYR356) H11
	  (GLY359)  (SER364) E12
	  (SER374)  (GLY382) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      154.4°   H2                                                                                  
E3      -20.5°  169.0°   E3                                                                           
H4      129.0°  -27.0°  149.1°   H4                                                                    
E5      -57.3°  144.7°  -36.9°  170.0°   E5                                                             
H6       92.0°  -73.2°  109.9°  -50.5°  139.5°   H6                                                      
E7      -77.1°  115.6°  -60.1°  135.3°  -35.0°  168.5°   E7                                               
H8     -150.0°  -50.6° -130.5°  -77.6°   94.4° -117.8°  -73.4°   H8                                        
H9       95.2°  -75.0°  110.4°  -56.4°  133.2°  -12.9°  168.2° -113.1°   H9                                 
E10     -79.9°  104.3°  -68.1°  117.9°  -53.3°  154.3°  -20.8°  -74.3°  167.1°   E10                         
H11      96.9°  -77.3°  109.6°  -61.9°  127.2°  -22.0°  161.2°  109.6°   -9.2° -175.6°   H11                  
E12     -59.7°  110.3°  -58.9°  107.8°  -67.8°  122.1°  -49.2° -102.7°  134.0°  -33.7°  142.0°   E12           
H13     141.4°  -59.6°  121.6°  -86.6°   85.4° -125.9°   65.5°   -9.0° -120.0°   68.7° -115.4°   99.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pf0a_ :   (HIS135)  (GLY382)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d2pboa_ :   (HIS135)  (GLY382)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1eqpa_ :   (ARG129)  (GLY382)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exo-beta-(1,3)-glucanase |Yeast (Candida albicans) [TaxId: 5476]
 d4m80a_ :   (ARG129)  (GLY382)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1cz1a_ :   (ARG129)  (GLY382)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exo-beta-(1,3)-glucanase |Yeast (Candida albicans) [TaxId: 5476]
 d2pc8a_ :   (HIS135)  (GLY382)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1