Protein Concepts Dictionary

Tableau information

Concept source:  d3esza_  amino acid (a.a.) range (ALA3)(GLY168)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA3)    (GLY9) E1
	   (GLY13)   (PHE26) H2
	   (VAL30)   (ASP35) E3
	   (GLU40)   (ASP46) H4
	   (TYR49)   (PRO55) E5
	   (SER64)   (ASP75) H6
	   (ASP75)   (GLY80) E7
	   (LEU82)   (THR88) E8
	   (ALA95)   (PHE98) H9
	  (ASP100)  (GLY113) H10
	  (GLY113)  (THR122) E11
	  (GLY140)  (ASP144) E12
	  (GLN148)  (GLY168) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      167.5°   H2                                                                                  
E3      -21.1° -169.9°   E3                                                                           
H4     -151.3°   19.5° -170.3°   H4                                                                    
E5      -14.2°  153.3°  -34.7°  139.1°   E5                                                             
H6     -129.6°   61.9°  113.3°  -68.5° -142.5°   H6                                                      
E7     -134.6°   35.4° -154.7°   16.6° -122.7°  -80.7°   E7                                               
E8      -33.2°  135.0°  -50.7°  126.0°  -20.3° -162.8° -111.7°   E8                                        
H9      156.2°  -35.0°  139.7°  -43.8°  166.9°   26.9°  -58.4° -169.6°   H9                                 
H10     135.1°  -57.2°  116.5°  -67.1°  149.0°   10.2°  -81.2°  166.9°   23.4°   H10                         
E11     -67.3°  100.3°  -88.2°   86.0°  -53.6° -145.6°   70.5°  -41.8° -128.9° -150.4°   E11                  
E12     -45.5°  123.8°  -60.0°  118.8°  -33.8° -172.0°  107.1°  -14.0° -158.3°  165.7°  -42.0°   E12           
H13     143.6°  -48.2°  126.2°  -57.0°  156.7°   14.2°   71.1°  176.8°   13.6°  -10.1°  140.7° -168.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3eszb_ :     (ALA3)  (GLY168)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Anabaena sp. [TaxId: 1168]
 d1oboa_ :  (LYS1003) (THR1152)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Anabaena, pcc 7119 and 7120 [TaxId: 1163]
 d3esza_ :     (ALA3)  (GLY168)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Anabaena sp. [TaxId: 1168]
 d1obva_ :  (LYS1003) (GLY1168)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Anabaena, pcc 7119 and 7120 [TaxId: 1163]
 d3esya_ :     (LYS3)  (GLY168)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Anabaena sp. [TaxId: 1168]
 d1flva_ :     (LYS3)  (THR152)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Anabaena, pcc 7119 and 7120 [TaxId: 1163]
 d1dx9a_ :     (LYS3)  (THR152)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Anabaena, pcc 7119 and 7120 [TaxId: 1163]
 d2v5vb_ :     (LYS3)  (GLY168)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Anabaena, pcc 7119 and 7120 [TaxId: 1163]
 d2v5ua_ :     (LYS3)  (GLY168)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Anabaena sp. [TaxId: 1168]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23