Protein Concepts Dictionary

Tableau information

Concept source:  d1auqa_  amino acid (a.a.) range (ASP514)(ALA698)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEEHHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP514)  (ASP520) E1
	  (SER526)  (LEU544) H2
	  (ARG552)  (GLU557) E3
	  (GLY561)  (TYR565) E4
	  (PRO574)  (VAL584) H5
	  (SER593)  (SER607) H6
	  (SER615)  (LEU621) E7
	  (PRO627)  (ARG632) H8
	  (ASN633)  (LYS645) H9
	  (LYS645)  (GLY654) E10
	  (LEU659)  (GLN668) H11
	  (LYS673)  (SER678) E12
	  (GLU682)  (ALA698) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      172.1°   H2                                                                                  
E3      -10.5°  177.0°   E3                                                                           
E4      125.8°  -49.8°  132.9°   E4                                                                    
H5      -16.0°  165.6°   13.0°  141.6°   H5                                                             
H6      157.3°  -28.4°  150.7°  -52.0°  158.4°   H6                                                      
E7      -12.8°  159.9°  -23.0°  114.2°  -27.4°  156.6°   E7                                               
H8      154.3°  -32.6°  144.5°  -78.4°  139.8°   31.4° -167.0°   H8                                        
H9     -161.7°  -12.4° -170.4°  -37.6° -170.6°   30.6° -148.9°   44.0°   H9                                 
E10     -29.6°  142.7°  -40.0°  101.0°  -42.0°  151.4°  -17.3° -171.5° -132.5°   E10                         
H11     162.2°  -21.2°  156.1°  -70.9°  146.3°  -36.0° -166.8°  -17.4°  -33.5° -154.7°   H11                  
E12     -29.8°  143.9°  -39.1°   96.7°  -44.9°  143.0°  -17.5°  174.4°  132.0°  -12.0° -161.9°   E12           
H13     149.8°  -37.0°  140.0°  -82.8°  135.3°  -34.9°  162.5°   -4.6°  -48.5°  171.6°   20.6° -176.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4c2bg_ :  (ASP1277) (ALA1461)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1oaka_ :   (ASP514)  (ALA698)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
 d4c2aa_ :  (ASP1277) (LEU1460)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1auqa_ :   (ASP514)  (ALA698)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
 d4c29a_ :  (ASP1277) (ALA1461)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4c2ba_ :  (ASP1277) (ALA1461)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hxqa_ :   (ASP514)  (GLN686)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hxoa_ :   (ASP514)  (ARG687)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
 d1ijka_ :   (ASP514)  (ALA698)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
 d1uexc_ :   (ASP514)  (GLN686)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.62