Protein Concepts Dictionary

Tableau information

Concept source:  d3moya_  amino acid (a.a.) range (LYS97)(LYS251)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEEHHEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS97)  (VAL103) E1
	  (GLY109)  (CYS118) H2
	  (ASP119)  (ASP125) E3
	  (THR126)  (GLY130) E4
	  (GLY143)  (ALA151) H5
	  (LYS154)  (GLY164) H6
	  (GLY164)  (THR168) E7
	  (THR168)  (VAL175) H8
	  (SER179)  (PRO183) E9
	  (LEU187)  (ARG200) H10
	  (ARG203)  (ARG219) H11
	  (PRO220)  (MET235) H12
	  (HIS239)  (LYS251) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2     -141.2°   H2                                                                                  
E3      -19.2° -126.0°   E3                                                                           
E4      105.8° -101.8° -125.0°   E4                                                                    
H5      -89.4°   53.3°  -79.4° -118.3°   H5                                                             
H6       56.6° -153.1°   64.3°  -85.9°  143.7°   H6                                                      
E7      -94.2°   51.9°  -75.9°  152.0°   41.1° -121.9°   E7                                               
H8      141.8°  -40.9° -144.9°   62.6°   69.1° -145.6°  -89.5°   H8                                        
E9      -40.5°  119.5°  -25.8° -138.7°  -89.6°   57.0°  -68.4° -157.2°   E9                                 
H10     168.9°   30.8°  156.7°  -75.5°   80.5° -134.3°   81.2°   28.9°  143.0°   H10                         
H11      71.0°  119.9°   89.0°  -39.7°   99.2°  -82.4°  139.0°   81.4° -110.9°  105.9°   H11                  
H12    -120.8°  -52.0° -102.9°  129.5°  -82.5°  103.3°  -46.1°  -88.3°   80.8°   62.6°  168.1°   H12           
H13     -67.4°  -74.1°   52.8° -141.9°  -30.0°  115.2°   33.1°  -98.7°   59.6°  104.6° -108.8°  -78.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3peaa_ :    (PRO97)  (GLU249)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3trrb_ :    (LYS90)  (LYS244)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d2vx2e_ :   (GLY148)  (LEU291)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qkab_ :    (LYS94)  (SER230)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d3h81a_ :   (PRO117)  (ILE268)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3moya_ :    (LYS97)  (LYS251)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d3qkae_ :    (LYS94)  (GLY241)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d1ey3a_ :   (GLY136)  (LYS282)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4olqc_ :   (PRO100)  (ASP251)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Hyphomonas neptunium [TaxId: 228405]
 d2hw5a_ :   (GLY136)  (LYS282)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3r9qc_ :    (LYS98)  (ALA237)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d3hina_ :   (PRO108)  (VAL266)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d4jota_ :   (PRO108)  (GLY253)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
 d1dubb_ :   (LYS128)  (VAL280)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3hinb_ :   (PRO108)  (HIS261)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3r9qa_ :    (LYS98)  (THR238)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14