Protein Concepts Dictionary

Tableau information

Concept source:  d1jaha_  amino acid (a.a.) range (MET1)(GLN165)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEEHHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)   (ALA11) E1
	   (GLY15)   (ASN26) H2
	   (ILE36)   (LYS42) E3
	   (CYS51)   (GLN61) E4
	   (GLN61)   (SER65) H5
	   (SER65)   (GLY75) H6
	   (GLY77)   (ALA83) E7
	   (THR87)  (LYS104) H8
	  (PRO110)  (GLY115) E9
	  (GLY115)  (ALA121) H10
	  (ARG128)  (GLY138) H11
	  (ILE139)  (GLU143) E12
	  (GLY151)  (GLN165) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      147.9°   H2                                                                                  
E3      148.3°   25.5°   E3                                                                           
E4      -18.7° -156.0°  167.0°   E4                                                                    
H5     -123.3°   88.7°  -81.3° -109.1°   H5                                                             
H6     -146.1°   43.3°   19.4° -158.6°  -68.1°   H6                                                      
E7      -28.4°  119.9°  123.5°  -44.5° -151.4° -131.1°   E7                                               
H8      134.4°  -76.7°  -73.7°  118.1°   14.1°  -64.1°  162.5°   H8                                        
E9      -40.2°  107.8°  113.7°  -55.1° -163.5°  124.4°  -12.2°  171.2°   E9                                 
H10     -59.0°   89.9°   93.5°  -75.1° -170.8°  105.0°  -30.8° -166.5°   20.1°   H10                         
H11     129.1°  -82.9°  -75.7°  114.9°    5.9°  -63.1°  157.2°  -10.3°  169.3° -167.7°   H11                  
E12     -69.1°   79.3°   93.5°  -79.1°  160.8°  110.7°  -43.6°  147.2°  -32.0°  -26.3°  157.2°   E12           
H13     120.2°  -91.7°  -79.5°  109.1°  -11.9°  -63.5°  146.1°  -24.1°  157.6°  159.3°  -13.8°  170.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uptg_ :    (THR15)  (ARG180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARL1 [TaxId: 9606]
 d4nyiq_ :     (MET1)  (HIS166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d4k81b_ :     (MET1)  (HIS166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d1agpa_ :     (MET1)  (HIS166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d3kuda_ :     (MET1)  (GLN165)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d3ddca_ :     (MET1)  (HIS166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d1uptc_ :    (ARG19)  (ARG180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARL1 [TaxId: 9606]
 d1rrpc_ :     (GLN8)  (LEU168)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d1qbkc_ :     (GLN8)  (LEU168)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d1lfdb_ :   (MET201)  (LYS367)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d4l9wa_ :     (MET1)  (HIS166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d1yvda1 :     (SER2)  (ARG165)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab-22a |Mouse (Mus musculus) [TaxId: 10090]
 d1yu9a1 :     (ASP6)  (LEU170)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab4a |Human (Homo sapiens) [TaxId: 9606]
 d1rrpa_ :     (GLN8)  (LEU168)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d1jaha_ :     (MET1)  (GLN165)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37