Protein Concepts Dictionary

Tableau information

Concept source:  d2g0nb_  amino acid (a.a.) range (MET1)(GLY178)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)   (ASP11) E1
	   (GLY15)   (ILE21) H2
	   (ASP38)   (ASN43) E3
	   (LYS49)   (ALA59) E4
	   (TYR64)   (TYR72) H5
	   (VAL77)   (SER83) E6
	   (PRO87)  (HIS104) H7
	  (PRO109)  (GLY114) E8
	  (LYS116)  (ASP122) H9
	  (ASP122)  (LYS133) H10
	  (TYR139)  (GLY150) H11
	  (TYR154)  (SER158) E12
	  (GLY164)  (GLY178) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2      152.5°   H2                                                                                  
E3      137.4°   32.9°   E3                                                                           
E4      -24.5° -158.1°  161.8°   E4                                                                    
H5     -160.3°   29.5°  -25.6°  169.3°   H5                                                             
E6      -29.9°  122.7°  117.4°  -47.6°  142.4°   E6                                                      
H7      132.4°  -74.9°  -81.4°  113.1°  -56.8°  160.8°   H7                                               
E8      -46.3°  106.5°  105.9°  -61.6°  129.0°  -16.5°  168.8°   E8                                        
H9       35.6°  122.8°  101.9°   60.0° -126.4°   28.4° -150.9°   37.1°   H9                                 
H10      49.2° -156.9° -133.5°   42.9° -128.1°   78.9°   85.1°  -95.4°  -71.6°   H10                         
H11     113.2°  -94.2°  -96.5°   95.8°  -73.7°  142.6°  -19.5°  157.3°  134.6°   65.7°   H11                  
E12     -81.3°   78.5°  100.7°  -80.4°  108.0°  -58.7°  124.7°  -46.4°  -83.5°  123.2°  133.1°   E12           
H13     121.4°  -85.1°  -79.4°  109.8°  -59.5°  150.3°  -21.8°  166.0°  129.7°  -72.3°  -19.5° -146.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1s1ca_ :     (ALA3)  (GLN180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d2gcpa_ :     (ILE4)  (GLN180)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0vb_ :     (SER4)  (LEU176)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3sbdb_ :     (LYS5)  (ALA175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gcna_ :     (ALA3)  (LEU179)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoC |Human (Homo sapiens) [TaxId: 9606]
 d1g4ur_ :     (MET1)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
 d2g0na_ :     (LYS5)  (ALA175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a4ra_ :     (GLN2)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d2h7va_ :     (MET1)  (CYS178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2g0nb_ :     (MET1)  (GLY178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wm9b_ :     (MET1)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d1a2ba_ :     (LYS6)  (ALA178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d1kmqa_ :     (LYS6)  (GLN180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d3b13b_ :     (MET1)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2p2lc_ :     (MET1)  (PRO179)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
 d2w2ta_ :     (ILE4)  (CYS178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1z2ca1 :     (ALA3)  (ALA177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoC |Human (Homo sapiens) [TaxId: 9606]
 d1cxza_ :     (SER0)  (LEU179)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d4itrc_ :     (LYS5)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d2h7vb_ :     (MET1)  (PRO179)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3lw8a_ :     (ALA3)  (LEU179)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d2yind_ :     (MET1)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1he1c_ :     (PRO1)  (ALA175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
 d3lw8d_ :     (SER1)  (GLN180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d4f38a_ :     (ALA3)  (GLN180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37