Tableau information
Concept source: d4o0ia1 amino acid (a.a.) range (ALA300)(GLU456)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: EHEEEHHEHEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA300) (ARG306) E1
(THR308) (ALA313) H2
(ALA317) (GLU321) E3
(ALA330) (ASN339) E4
(GLY342) (PRO348) E5
(PRO348) (ASP354) H6
(ASP354) (GLY362) H7
(LYS366) (MET370) E8
(SER373) (GLY384) H9
(SER391) (LEU395) E10
(LEU396) (ASP402) H11
(ASP409) (GLN418) H12
(GLU440) (GLU456) H13
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -116.4° H2
E3 -65.2° -107.0° E3
E4 121.2° 83.7° 164.0° E4
E5 -41.3° -105.8° -26.2° 162.3° E5
H6 59.6° -79.2° -120.0° 73.0° -93.8° H6
H7 -115.5° -4.4° -110.8° 80.5° -108.1° -75.4° H7
E8 -123.1° 74.1° -58.6° 115.4° -81.9° -150.6° -78.3° E8
H9 -12.8° -128.9° 61.5° -121.0° 41.5° -69.0° -128.1° 120.1° H9
E10 -116.5° 80.0° -51.6° 121.4° -75.5° -153.0° -84.3° 7.5° 112.8° E10
H11 -138.0° 25.8° -101.4° 83.0° -112.1° -103.6° 28.9° -52.9° -148.4° -59.9° H11
H12 148.5° 58.0° -145.3° -33.2° 162.4° 89.6° 56.2° 86.7° -153.0° 93.8° 50.4° H12
H13 112.7° 37.8° 142.6° -51.4° 130.0° -55.3° 33.6° 106.1° -123.6° 113.2° 53.3° 41.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ua0a1 : (ALA300) (GLU456) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d4dqqd1 : (MET299) (GLU456) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 235909]
d1l3sa1 : (ALA300) (GLU456) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d2hvha1 : (MET299) (ASN468) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d3px6d1 : (MET299) (GLU456) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d2bdpa1 : (ALA300) (GLU456) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d2hhqa1 : (ALA300) (ASN468) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d1u45a1 : (MET299) (ASN468) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d1lv5a1 : (ALA300) (GLU456) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d4o0ia1 : (ALA300) (GLU456) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.55