Protein Concepts Dictionary

Tableau information

Concept source:  d2wjga_  amino acid (a.a.) range (LYS2)(LYS166)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS2)   (ASN11) E1
	   (GLY15)   (GLY25) H2
	   (ASN27)   (GLY31) E3
	   (VAL38)   (TYR47) E4
	   (GLU50)   (ASP56) E5
	   (SER67)   (GLU80) H6
	   (LEU84)   (ASP90) E7
	   (LEU94)  (GLY108) H8
	  (ASN110)  (ASN116) E9
	  (LYS117)  (GLY125) H10
	  (VAL130)  (ILE136) H11
	  (LYS140)  (LEU144) E12
	  (GLY151)  (LYS166) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2     -159.0°   H2                                                                                  
E3      -55.2°  135.0°   E3                                                                           
E4      135.4°   40.6°  164.9°   E4                                                                    
E5      -27.2° -151.1°  -30.6°  162.4°   E5                                                             
H6     -152.2°   43.8°  127.4°  -37.6°  155.6°   H6                                                      
E7      -27.9°  132.7°  -80.9°  112.2°  -50.5° -145.1°   E7                                               
H8      138.7°  -61.7°   89.9°  -75.7°  120.3°  -38.8° -165.1°   H8                                        
E9      -53.4°  106.0°  -98.8°   96.2°  -69.2°  133.8°  -27.3°  167.6°   E9                                 
H10      33.5°  138.4°  -85.8° -102.5°   60.7° -124.2°   26.9° -141.5°   48.9°   H10                         
H11     108.8°  -90.6°   61.0° -104.0°   90.7°  -66.4°  136.6°  -30.4°  159.8°  123.1°   H11                  
E12     -69.5°   89.9°  -97.5°   97.0°  -74.2°  129.8°  -49.4°  144.4°  -25.7°  -74.0°  148.1°   E12           
H13     116.8°  -83.9°   74.2°  -90.7°  102.8°  -53.4°  142.7°  -22.5°  170.0°  122.4°  -14.5° -160.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2wjgb_ :     (LYS2)  (ASP165)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2wjga_ :     (LYS2)  (LYS166)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2wjha_ :     (MET1)  (ASP165)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2wjja_ :     (MSE1)  (LYS167)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2wjjb_ :     (MSE1)  (ASP165)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37