Tableau information
Concept source: d2zu2a_ amino acid (a.a.) range (LYS5)(ARG130)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS5) (GLY11) E1
(GLY11) (VAL17) H2
(VAL18) (GLY23) E3
(LEU27) (GLY33) E4
(ASP34) (PRO39) E5
(ASP54) (MET60) H6
(ASN64) (SER69) E7
(ALA72) (VAL77) E8
(VAL77) (GLY83) E9
(VAL84) (VAL90) E10
(SER101) (SER107) E11
(ASN112) (ASP118) E12
(GLN122) (ARG130) E13
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -60.1° H2
E3 -86.1° 26.2° E3
E4 57.4° 108.7° 128.1° E4
E5 -148.2° -88.8° -63.3° 150.1° E5
H6 -19.2° 64.4° 89.9° -67.8° 141.9° H6
E7 -95.6° -149.9° 163.9° -64.6° 111.3° -86.8° E7
E8 82.2° -65.6° -63.3° 75.3° -91.0° -100.7° 132.7° E8
E9 160.1° -116.0° -90.7° 111.3° -39.0° -179.1° 92.9° -78.8° E9
E10 -21.1° 77.8° 103.8° -53.3° 156.7° -15.7° -75.4° 100.4° 163.5° E10
E11 -167.9° -107.9° -81.9° 132.9° -19.9° 157.7° 95.4° -94.0° -23.2° 165.6° E11
E12 -57.6° -29.1° -44.7° 114.9° -92.3° 51.1° 124.1° -94.4° -129.7° 66.8° -111.6° E12
E13 130.2° 106.6° 87.9° -90.0° 61.2° -149.4° -102.8° 51.6° 29.9° -140.8° 51.4° 132.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2a5aa_ : (LYS5) (GLN127) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2zu2b_ : (LYS5) (ARG130) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus 229E [TaxId: 11137]
d2alva1 : (LYS5) (PRO132) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2zu2a_ : (LYS5) (ARG130) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus 229E [TaxId: 11137]
d2bx4a_ : (LYS5) (ARG131) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Sars coronavirus sin2774 [TaxId: 235410]
d1p9sb_ : (LYS5) (GLY126) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus 229E [TaxId: 11137]
d2ynab_ : (LYS5) (LEU133) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Tylonycteris bat coronavirus hku4 [TaxId: 694007]
d1p9sa_ : (LYS5) (GLY126) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus 229E [TaxId: 11137]
d2q6gb_ : (LYS5) (GLN127) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47