Protein Concepts Dictionary

Tableau information

Concept source:  d2ifcd_  amino acid (a.a.) range (LEU20)(ALA225)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU20)   (ASP24) E1
	   (GLY28)   (TYR32) E2
	   (SER36)   (GLY44) H3
	   (ASP47)   (GLY57) H4
	   (THR61)   (ILE78) H5
	   (ASP80)   (LEU89) H6
	   (ASP94)  (GLU110) H7
	  (ASN116)  (ASN144) H8
	  (SER155)  (GLY166) H9
	  (THR170)  (TYR184) H10
	  (ALA191)  (VAL200) H11
	  (ASP205)  (LYS218) H12
	  (GLY219)  (ALA225) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      170.0°   E2                                                                                  
H3     -115.3°   64.1°   H3                                                                           
H4      102.1°   76.3°  139.4°   H4                                                                    
H5      -99.6°   90.4°  -91.2°   97.8°   H5                                                             
H6      -40.7° -149.1° -106.0°  112.7°  -59.6°   H6                                                      
H7     -149.3°   28.0°   91.8°  -48.3°   93.7°  147.4°   H7                                               
H8       69.6° -117.7°  -69.9°  142.4°  -50.7°  -37.9°  137.5°   H8                                        
H9      -92.7°   96.5°  -74.5°  120.5°  -22.8°  -53.0°  109.1°  -30.1°   H9                                 
H10     -83.4°   96.1°  159.6°   20.2°   93.7°   93.5°  -68.1°  127.5°  114.6°   H10                         
H11    -143.5°   38.2°  101.2°  -42.7°   80.5°  131.4°  -16.1°  128.8°   98.8°  -60.3°   H11                  
H12      26.2° -161.7° -102.3°  118.2°  -77.1°  -18.2° -163.1°  -44.0°  -66.9°   98.0°  147.6°   H12           
H13      89.3°  -86.6°  -31.4°  144.2° -113.9°  -98.1°  110.5°  -73.4°  -92.3°  152.3° -124.5°  -86.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1aj8a_ :    (ILE20)  (GLY238)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Pyrococcus furiosus [TaxId: 2261]
 d1vgma_ :    (LEU19)  (ALA222)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d1owba_ :    (ILE56)  (ILE278)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Escherichia coli [TaxId: 562]
 d2ifca_ :    (LEU20)  (ALA225)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d2r26a_ :    (LEU20)  (ILE236)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d1vgpa_ :    (ILE17)  (ILE229)   [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d3msub_ :    (ILE62)  (GLY268)   [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Francisella tularensis [TaxId: 263]
 d1o7xa_ :    (LEU18)  (GLY220)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Sulfolobus solfataricus [TaxId: 2287]
 d2ifcd_ :    (LEU20)  (ALA225)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d2ifcc_ :    (LEU20)  (ALA225)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d2r26c_ :    (LEU20)  (ILE236)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Thermoplasma acidophilum [TaxId: 2303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.103