Tableau information
Concept source: d4mcuf_ amino acid (a.a.) range (GLN8)(LYS187)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: EEHHEHHHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN8) (LYS14) E1
(GLN21) (SER27) E2
(CYS30) (HIS41) H3
(VAL42) (LEU50) H4
(MET56) (HIS60) E5
(LEU67) (LEU81) H6
(VAL83) (GLN99) H7
(SER103) (GLY115) H8
(LYS117) (SER127) H9
(SER127) (GLN145) H10
(PRO150) (VAL154) E11
(LYS157) (PRO162) E12
(MET170) (LYS187) H13
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 98.6° E2
H3 -127.6° -122.8° H3
H4 -81.7° -174.4° 54.0° H4
E5 70.0° -29.4° -149.0° 151.6° E5
H6 -96.9° 139.8° 30.8° -35.0° -147.5° H6
H7 103.7° 28.1° -128.2° 157.2° 39.9° 157.6° H7
H8 -123.3° 124.0° 5.0° -52.3° 148.3° -26.5° 131.9° H8
H9 42.6° -106.2° 130.2° 77.8° -80.6° 110.3° -91.1° 129.6° H9
H10 100.0° -97.1° 104.5° 88.3° -95.5° 116.4° -69.0° 108.6° -57.7° H10
E11 -71.5° 169.9° -66.6° 12.7° 140.6° -46.4° -150.4° -65.0° 65.3° 82.9° E11
E12 151.2° -53.8° 79.7° 126.6° -81.6° 109.8° -48.4° 83.5° -129.9° -78.1° 135.5° E12
H13 -39.3° 137.9° -93.4° -42.5° 109.1° -65.3° 137.2° -90.2° 48.2° 93.2° 32.4° 167.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1a2la_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4dvca_ : (HIS8) (LEU178) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Vibrio cholerae [TaxId: 243277]
d2b6ma_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Escherichia coli [TaxId: 562]
d3dksa_ : (GLN8) (GLU188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Shigella flexneri [TaxId: 623]
d4ocfa_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Proteus mirabilis [TaxId: 529507]
d4jrrb_ : (ASP39) (GLY200) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d3l9sa_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Salmonella enterica [TaxId: 216597]
d3a3ta_ : (ASN31) (GLN210) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 491]
d4ocfc_ : (SER13) (MET186) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Proteus mirabilis [TaxId: 529507]
d4mcua_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d1acva_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4mcuf_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d3dksb_ : (GLN8) (GLU187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Shigella flexneri [TaxId: 623]
d1a2ja_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4mcub_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d4jrra_ : (ASP39) (GLY200) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d3h93a_ : (GLU11) (GLY170) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1beda_ : (HIS8) (LEU180) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Vibrio cholerae [TaxId: 666]
d1u3ae_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4k2da_ : (ASP16) (LYS195) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 272560]
d1ti1a_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d3hd5b_ : (GLN32) (ASN191) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d1ac1a_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4mcud_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d1u3aa_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d3dksd_ : (GLN8) (GLU187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Shigella flexneri [TaxId: 623]
d2b6mb_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Escherichia coli [TaxId: 562]
d1fvja_ : (GLN8) (LYS188) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d4mcuc_ : (GLN8) (LYS187) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Klebsiella pneumoniae [TaxId: 507522]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47