Protein Concepts Dictionary

Tableau information

Concept source:  d1w0da_  amino acid (a.a.) range (ASN131)(GLY319)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEHEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN131)  (ARG136) E1
	  (ASN141)  (THR151) E2
	  (THR151)  (ARG169) H3
	  (LYS171)  (HIS177) E4
	  (PHE184)  (PRO201) H5
	  (GLU204)  (HIS209) E6
	  (VAL210)  (ASP220) H7
	  (ASP225)  (THR229) E8
	  (ASN231)  (GLY246) H9
	  (LEU250)  (ILE256) E10
	  (PRO263)  (PRO268) E11
	  (PRO284)  (GLY299) H12
	  (HIS301)  (GLY319) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      171.4°   E2                                                                                  
H3     -128.8°  -56.5°   H3                                                                           
E4       18.8° -154.8°  147.4°   E4                                                                    
H5     -170.6°   14.6°  -42.3° -169.3°   H5                                                             
E6       -6.0° -173.5°  130.0°  -18.8°  171.9°   E6                                                      
H7     -114.3°   72.8°   21.1° -132.4°   58.2°  113.7°   H7                                               
E8       46.8° -128.4°  174.2°  -28.5°  142.4°  -45.2° -153.2°   E8                                        
H9     -104.8°   82.0°   28.0°  123.2°  -67.4°  104.5°   -9.6° -146.2°   H9                                 
E10    -103.1°   70.9°  127.4°  -84.4°   85.3° -102.6°  141.7°  -57.8°  151.2°   E10                         
E11      66.7° -118.5°  -62.2°   85.4° -104.4°   67.9°  -49.7°  113.1°  -40.3°  168.1°   E11                  
H12    -130.4°   41.9°   96.4° -113.0°   56.4° -131.7°  114.5°  -89.1°  123.5°  -32.3°  152.2°   H12           
H13      58.1° -127.4°  -70.9°   76.8° -113.2°   59.1°  -57.5°  104.2°  -47.9° -160.8°   -8.9° -159.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2y42c_ :   (ARG144)  (GLU321)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
 d1itwa_ :   (LEU445)  (ALA620)   [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
 d1cm7b_ :   (LYS150)  (GLY333)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Escherichia coli [TaxId: 562]
 d3udua_ :   (GLY146)  (GLY327)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Campylobacter jejuni [TaxId: 197]
 d3udub_ :   (GLY146)  (GLY327)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Campylobacter jejuni [TaxId: 197]
 d4f7ia_ :   (ARG144)  (GLY303)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d4f7ic_ :   (ARG144)  (GLU321)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1xaca_ :   (GLU142)  (GLY303)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Chimera (Thermus thermophilus) and (Bacillus subtilis) [TaxId: 274]
 d1vlca_ :   (LYS152)  (GLU322)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermotoga maritima [TaxId: 2336]
 d1v5ba_ :   (SER146)  (GLY328)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Bacillus coagulans [TaxId: 1398]
 d1itwc_ :   (LEU445)  (ALA620)   [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
 d1v53a_ :   (SER146)  (ASP327)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Bacillus coagulans [TaxId: 1398]
 d3r8wa_ :   (GLY149)  (ASN331)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1v5bb_ :   (SER146)  (ASP327)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Bacillus coagulans [TaxId: 1398]
 d1cnza_ :   (LYS150)  (GLY333)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Salmonella typhimurium [TaxId: 90371]
 d1ipda_ :   (ARG144)  (GLU321)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
 d4wuob_ :   (ARG144)  (GLU321)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
 d3flka_ :   (LEU144)  (GLY338)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
 d1w0da_ :   (ASN131)  (GLY319)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Mycobacterium tuberculosis [TaxId: 1773]
 d1j1wa_ :   (LEU445)  (TYR621)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.77