Tableau information
Concept source: d1yexb_ amino acid (a.a.) range (PRO9)(ALA159)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO9) (ASN17) E1
(ILE21) (GLU25) E2
(TRP32) (TYR38) E3
(PRO47) (TYR57) H4
(TYR57) (GLY64) H5
(GLY64) (VAL70) E6
(THR74) (SER84) H7
(SER85) (LYS90) H8
(TYR93) (PRO99) E9
(ALA102) (ASP108) H10
(ARG119) (ASP125) E11
(GLN131) (ALA137) E12
(ALA144) (ALA159) H13
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 145.9° E2
E3 78.5° -112.9° E3
H4 -82.1° 86.0° -160.1° H4
H5 -132.5° 51.4° -146.3° -51.2° H5
E6 93.7° -106.7° -20.2° -161.4° 127.2° E6
H7 -26.2° 120.1° 84.9° -79.8° -128.5° 104.3° H7
H8 -112.2° 61.6° -167.9° 30.1° -21.7° -148.0° -107.2° H8
E9 126.0° -81.5° -52.7° 141.3° 93.7° -33.8° 137.6° -115.2° E9
H10 -122.6° 24.7° -106.4° 88.1° 70.5° -109.2° 96.5° 73.1° -95.1° H10
E11 -107.5° 66.1° 170.9° -25.5° 25.9° 150.8° -103.5° 4.8° 118.8° 76.5° E11
E12 67.5° -118.2° -12.7° 149.6° -158.8° -32.7° 72.2° 179.2° -65.4° -106.4° 175.0° E12
H13 -129.7° 47.1° 151.6° -47.6° 9.1° 133.9° -121.6° -17.7° 100.1° 63.8° -22.4° 162.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yepa_ : (ASN12) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d4maba_ : (PRO9) (HIS160) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella enterica [TaxId: 90371]
d1yf0b_ : (PRO9) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1yexb_ : (PRO9) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1yf1b_ : (ASN4) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1yepb_ : (PRO9) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d4mabb_ : (PRO9) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella enterica [TaxId: 90371]
d1n8ja_ : (PRO9) (HIS160) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1yexc_ : (THR5) (PRO161) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1yepd_ : (PRO9) (HIS160) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d4ma9b_ : (PRO9) (HIS160) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella enterica [TaxId: 90371]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47