Protein Concepts Dictionary

Tableau information

Concept source:  d4fe2b_  amino acid (a.a.) range (ALA11)(PHE181)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEHEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA11)   (THR16) E1
	   (ASN21)   (TYR27) E2
	   (ASP29)   (PHE34) E3
	   (VAL37)   (ALA43) E4
	   (LYS45)   (GLY64) H5
	   (THR76)   (ASN80) E6
	   (VAL90)   (ASN94) E7
	   (GLY98)  (PHE104) H8
	  (ILE116)  (TYR121) E9
	  (GLU134)  (GLN140) H10
	  (ASP144)  (GLY169) H11
	  (GLY169)  (ASP174) E12
	  (PHE175)  (PHE181) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      151.7°   E2                                                                                  
E3      118.5°  -86.1°   E3                                                                           
E4      -72.3°   87.6°  163.0°   E4                                                                    
H5      -63.3°  138.0°   84.8°  -89.5°   H5                                                             
E6      -52.2°  156.1°   73.1°  109.0°   30.8°   E6                                                      
E7      136.8°  -53.4°  -84.3°   79.3°   85.0°  111.5°   E7                                               
H8     -123.5°   81.9°   -5.7°  157.7°  -85.4°  -76.5°  -78.6°   H8                                        
E9      -62.7°  103.4°   96.2° -100.6° -118.3°  -90.7°  156.7°  100.9°   E9                                 
H10     -39.7°  122.0°  109.6°  -87.0°  -99.6°  -77.2° -165.6°  115.2°   23.3°   H10                         
H11     120.3°  -43.8° -119.5°   48.0°  109.5°  140.1°  -42.1° -113.9°  122.2°  124.0°   H11                  
E12     -74.4°  117.6°   51.6° -144.1°  -87.4°  -57.6° -135.8°   57.4°   51.2°   58.4°  161.0°   E12           
E13     -16.1°  155.2°  104.3°  -87.8°  -66.3°  -46.4°  148.7°  109.7°  -53.7°  -33.3°  135.7°  -58.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3u54b_ :    (ALA12)  (LYS180)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
 d2gqsa_ :    (ALA12)  (LEU182)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d4fe2a_ :    (ALA11)  (PHE181)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d4fgrb_ :    (ASP13)  (PHE181)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d2ywvb_ :    (ALA13)  (ARG183)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
 d4fe2b_ :    (ALA11)  (PHE181)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d3u55a_ :    (ALA12)  (LYS180)   [view usage] : d.143.1.0 |SAICAR synthase-like |SAICAR synthase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.143