Protein Concepts Dictionary

Tableau information

Concept source:  d1g0uh_  amino acid (a.a.) range (THR1)(ASP166)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHHEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR1)    (LYS7) E1
	   (GLY11)   (ASP17) E2
	   (THR18)   (GLN22) E3
	   (LYS33)   (SER38) E4
	   (LYS40)   (ALA46) E5
	   (THR48)   (TYR69) H6
	   (VAL76)   (GLN91) H7
	   (TYR98)  (GLY103) E8
	  (GLY107)  (ALA115) E9
	  (SER118)  (GLY122) E10
	  (TYR123)  (GLY128) E11
	  (LEU132)  (HIS141) H12
	  (THR147)  (ASP166) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      169.2°   E2                                                                                  
E3     -145.7°   42.9°   E3                                                                           
E4      -41.6° -147.9° -117.9°   E4                                                                    
E5     -145.6°   32.1°   37.2°  152.0°   E5                                                             
H6       34.7° -153.1° -128.2°   10.5°  162.0°   H6                                                      
H7     -144.2°   42.7°    8.3°  122.9°  -30.6°  133.4°   H7                                               
E8       32.9° -144.6° -156.5°  -41.7°  165.7°  -31.3°  163.6°   E8                                        
E9     -150.2°   36.4°   10.2°  127.8°  -27.0°  138.2°    6.2°  166.4°   E9                                 
E10     -54.0°  115.5°  153.0°  -88.7°  115.9°  -78.5°  146.2°  -50.0°  142.8°   E10                         
E11     173.9°  -16.0°   33.5°  132.5°   39.6° -139.2°   36.5° -143.6°   31.0°  129.7°   E11                  
H12     -25.1°  144.3° -154.0°  -66.0° -129.0°  -57.8° -147.1°   41.8° -149.8°   32.2°  160.1°   H12           
H13     161.5°  -20.1°   27.8°  145.1°   16.9°  155.0°   24.7° -164.6°   18.8°  126.2°  -23.1°  145.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1g0uj_ :     (ASP1)  (TYR142)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g0u2_ :     (THR1)  (LYS140)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3unb4_ :     (THR1)  (ALA141)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1ya7a_ :    (SER35)  (LEU201)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d1rypl_ :     (THR1)  (ASP168)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4eu2k_ :     (ASP1)  (LYS169)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g0ui_ :    (GLY-1)  (ASP166)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1pma1_ :     (THR1)  (ARG165)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Thermoplasma acidophilum [TaxId: 2303]
 d1irui_ :     (THR1)  (ASP166)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d1iruh_ :     (THR1)  (THR142)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d4r17k_ :     (THR2)  (ASP168)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3unfh_ :     (THR1)  (LEU164)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1z7qc1 :    (GLY33)  (THR200)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g0uh_ :     (THR1)  (ASP166)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ryph_ :    (GLU-5)  (TRP165)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3unbh_ :     (THR1)  (ASP166)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1j2qh_ :     (THR1)  (ASP166)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Archaeoglobus fulgidus [TaxId: 2234]
 d3wxrv_ :     (THR1)  (ASN141)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.153