Protein Concepts Dictionary

Tableau information

Concept source:  d3azva2  amino acid (a.a.) range (GLU1107)(GLU1265)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (GLU1107) (ASN1112) E1
	 (TYR1119) (GLY1124) E2
	 (VAL1128) (ASN1134) E3
	 (TYR1142) (ARG1148) E4
	 (VAL1163) (ASP1171) E5
	 (LYS1173) (LEU1177) E6
	 (ASP1189) (ALA1195) E7
	 (MSE1200) (TYR1206) H8
	 (TYR1206) (PHE1217) E9
	 (TYR1220) (LEU1226) E10
	 (LEU1238) (SER1242) E11
	 (PHE1253) (LEU1258) E12
	 (PRO1260) (GLU1265) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2       92.1°   E2                                                                                  
E3     -102.0°  145.6°   E3                                                                           
E4       99.7°   88.7° -119.0°   E4                                                                    
E5     -108.9°  -79.1°   66.7°  149.1°   E5                                                             
E6       37.9°  104.9° -105.4°  -64.9°  145.7°   E6                                                      
E7     -153.5°  -96.0°   58.8°  105.7°  -48.6° -156.5°   E7                                               
H8       25.6°  115.7°  -86.4°  -89.9°  121.0°  -26.3° -145.2°   H8                                        
E9       73.8°  164.5°  -37.5°  -99.9°   99.1°   67.9°  -94.1°   52.0°   E9                                 
E10     -83.0°   21.5°  167.2°   71.1° -100.5°  -85.9°  112.3° -102.2°  153.5°   E10                         
E11     -64.1°   80.7°  -77.7°  160.0°  -44.8°  101.5°  -92.3°   79.8°  -87.2°   94.2°   E11                  
E12    -102.4° -147.4°   59.5°  -60.3°  121.8°  -72.6°   84.0°  -77.0°  -45.7° -131.4° -132.0°   E12           
E13      61.1°  -77.7° -136.5°   41.0° -154.2°   36.0°  145.4°   61.3°  100.3°  -56.2°  119.6°  -83.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3n7ma2 :  (GLU1107) (GLU1265)   [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d4fvva2 :  (GLU1107) (GLU1264)   [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d3azwa2 :  (GLU1107) (GLU1265)   [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d3azva2 :  (GLU1107) (GLU1265)   [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.42