Tableau information
Concept source: d3r8bn_ amino acid (a.a.) range (ALA3)(TYR111)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA3) (SER7) E1
(ARG9) (ALA13) E2
(LYS18) (ASN27) E3
(ASN30) (THR39) E4
(GLU42) (ILE46) E5
(ILE46) (HIS50) E6
(ARG53) (LYS57) E7
(GLY63) (PRO69) E8
(GLU72) (LEU80) E9
(THR82) (VAL88) H10
(VAL88) (SER93) E11
(GLY97) (GLY102) E12
(THR105) (TYR111) E13
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 23.7° E2
E3 159.6° 167.4° E3
E4 -57.5° -63.8° 128.7° E4
E5 71.1° 65.1° -103.0° 127.6° E5
E6 135.6° 129.1° -38.4° -166.6° -65.8° E6
E7 -79.1° -72.0° 116.7° -34.0° -131.2° 139.2° E7
E8 127.0° 133.1° -37.1° 152.8° -69.3° -23.5° 153.6° E8
E9 -27.1° -21.1° 170.5° -42.9° 86.1° 149.5° -54.0° 152.3° E9
H10 -143.5° -166.1° 25.4° 105.3° -122.9° -62.7° 104.1° -53.7° -147.9° H10
E11 140.1° 130.7° -36.8° 162.3° -69.3° -6.1° 133.1° -28.6° 149.9° 61.9° E11
E12 -33.3° 56.9° 129.5° -55.0° 87.7° 132.7° -87.9° 111.9° -52.5° -110.2° 138.8° E12
E13 19.9° -10.9° 178.2° -53.1° 75.2° 139.8° -64.8° 141.3° -11.3° -156.0° 141.5° 50.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2iane1 : (GLY3) (VAL109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3o8xd1 : (ALA2) (GLU112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2apwa_ : (ALA3) (VAL116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3r8bn_ : (ALA3) (TYR111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4pjce1 : (GLN2) (ASP110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ogae1 : (GLY5) (GLU115) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d1nama_ : (LYS2) (PRO116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
d1fail1 : (ASP1) (ILE106) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d4pjae1 : (GLN2) (ASP110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2aq2a1 : (ALA3) (LEU117) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
d2oi9c_ : (ALA3) (VAL116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4pjff1 : (GLY3) (GLU115) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4nqcd1 : (GLN2) (ASP110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4l4th1 : (GLY3) (GLU116) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tvmh1 : (ALA2) (GLU112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4ms8d1 : (ALA3) (GLU112) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2f53e1 : (GLY1) (GLU112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d1fo0a_ : (LYS2) (PRO116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
d4pj9c1 : (GLN2) (ASN110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dzba1 : (GLN2) (PRO109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pjcf1 : (GLY3) (GLU115) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pj7e1 : (GLN2) (PRO109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pjhf1 : (GLY3) (GLU113) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pjag1 : (ASN3) (PRO109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2apfa_ : (ALA3) (VAL116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4pj7f1 : (GLY3) (GLU113) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2aq3c_ : (ALA3) (LEU117) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4pjhe1 : (GLN2) (ASP110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bnqe1 : (GLY2) (GLU113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d4pjde1 : (GLN2) (ASP110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3axlb1 : (ALA3) (GLU128) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2e7lc_ : (VAL4) (SER118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4pjbe1 : (GLN2) (ASP110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1