Protein Concepts Dictionary

Tableau information

Concept source:  d4ge1a_  amino acid (a.a.) range (GLY21)(GLN189)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY21)   (HIS27) E1
	   (HIS27)   (GLY31) E2
	   (CYS42)   (ALA51) E3
	   (GLY53)   (ASN63) E4
	   (LYS67)   (LYS77) E5
	   (ALA90)   (GLU96) E6
	  (ILE102)  (THR106) E7
	  (GLN108)  (ASP113) E8
	  (LYS118)  (ASP126) E9
	  (TYR132)  (ARG140) E10
	  (SER150)  (GLY160) H11
	  (ASP168)  (GLY173) H12
	  (ASP179)  (GLN189) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      -65.4°   E2                                                                                  
E3      145.4°   91.7°   E3                                                                           
E4      -44.3°  -91.4°  169.5°   E4                                                                    
E5      122.2°   81.0°  -23.9°  166.4°   E5                                                             
E6      -84.4°  -98.1°  126.1°  -43.4°  148.6°   E6                                                      
E7       86.5°   84.5°  -64.7°  125.7°  -42.8°  168.5°   E7                                               
E8       89.4°  144.9°  -97.2°   86.0°  -93.8°  103.7°  -69.1°   E8                                        
E9      -71.7°  -12.8°   91.7°  -89.1°   85.8°  -87.8°   96.1°  157.0°   E9                                 
E10     122.5° -171.7°  -80.0°   96.5°  -91.8°   85.8°  -93.1°  -39.2°  163.7°   E10                         
H11     -63.8°   11.8°   88.5°  -96.5°   74.0° -109.1°   72.9°  134.4°  -24.4°  164.8°   H11                  
H12      98.4°  119.4° -115.8°   54.2° -139.4°   22.0° -155.6°  -86.9°  108.2°  -64.0°  130.7°   H12           
H13     126.6°   66.3°  -25.7°  154.1°  -27.9°  123.7°  -67.6° -119.8°   66.2° -105.4°   64.3°  124.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4hfob_ :    (GLY21)  (GLN189)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Rhodnius prolixus [TaxId: 13249]
 d4ge1a_ :    (GLY21)  (GLN189)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Rhodnius prolixus [TaxId: 13249]
 d4hfoc_ :    (GLY21)  (GLN189)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Rhodnius prolixus [TaxId: 13249]
 d4hfoa_ :    (GLY21)  (GLN189)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Rhodnius prolixus [TaxId: 13249]
 d4ge1b_ :    (GLY21)  (GLN189)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Rhodnius prolixus [TaxId: 13249]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60