Protein Concepts Dictionary

Tableau information

Concept source:  d3ap4a_  amino acid (a.a.) range (ASN10)(PHE153)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN10)   (ASN14) E1
	   (PRO18)   (THR22) E2
	   (THR31)   (GLY37) E3
	   (ARG45)   (LEU50) E4
	   (ALA63)   (PRO68) E5
	   (ALA73)   (ASN83) E6
	   (GLU84)   (ASP94) E7
	  (PHE103)  (VAL109) E8
	  (LYS113)  (ASN119) E9
	  (LEU124)  (HIS128) E10
	  (GLY131)  (ASP136) H11
	  (ASP136)  (GLY142) E12
	  (VAL144)  (PHE153) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
E2      171.8°   E2                                                                                  
E3      -15.6°  157.4°   E3                                                                           
E4      165.2°  -10.1°  156.6°   E4                                                                    
E5      -35.2°  145.1°  -30.3°  154.3°   E5                                                             
E6      128.1°  -50.1°  132.5°  -40.2°  162.7°   E6                                                      
E7      -75.3°  106.5°  -69.5°  116.6°  -40.3°  156.5°   E7                                               
E8      152.4°  -32.4°  165.7°  -28.5°  159.0°  -36.6°  123.2°   E8                                        
E9      -45.5°  130.4°  -32.1°  136.4°  -24.2°  148.5°  -45.1°  161.9°   E9                                 
E10     128.5°  -50.6°  134.5°  -40.9°  163.7°   -4.8°  155.8°  -33.7°  153.0°   E10                         
H11      62.0° -109.9°   52.4° -105.0°  -77.3°   89.3° -103.5° -123.6°  -60.1°   93.3°   H11                  
E12     -11.4°  172.1°  -20.4°  176.5°  -26.9°  137.7°  -65.7°  153.1°  -43.0°  137.3°   71.6°   E12           
E13    -174.8°  -11.3°  162.3°  -19.6°  139.7°  -57.0°   99.6°  -31.0°  130.9°  -56.5° -120.8°  163.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3vkna_ :     (ASN7)  (PHE153)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ap6c_ :    (ASN10)  (SER152)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bmba_ :     (ASN7)  (PHE153)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yxsa_ :    (ASN17)  (PRO161)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d6lx_ :     (GLN7)  (ASN150)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3ap5a_ :    (ASN10)  (PHE153)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yv8a_ :    (ASN17)  (PRO161)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ap6b_ :    (ASN10)  (PHE153)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3vkla1 :     (GLN9)  (SER154)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ap4c_ :    (ASN10)  (PHE153)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ap4a_ :    (ASN10)  (PHE153)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hana1 :     (LEU8)  (HIS147)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ap7a_ :    (ASN10)  (SER154)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ap4d_ :    (ASN10)  (SER154)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d6ox_ :     (GLN7)  (GLN149)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29