Protein Concepts Dictionary

Tableau information

Concept source:  d3bk9d_  amino acid (a.a.) range (THR23)(ASN212)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR23)   (ARG29) H1
	   (LEU30)   (ALA36) H2
	   (GLU48)   (ASP79) H3
	   (VAL81)  (GLU106) H4
	  (THR109)  (MET114) H5
	  (MET114)  (LEU120) H6
	  (SER128)  (GLY139) H7
	  (PRO143)  (PHE149) H8
	  (PRO153)  (ALA165) H9
	  (SER167)  (GLY180) H10
	  (PRO184)  (ALA189) H11
	  (LEU202)  (ASN212) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2       67.6°   H2                                                                           
H3       68.3°  126.1°   H3                                                                    
H4     -102.4°  -40.8° -166.6°   H4                                                             
H5      -73.7°  -95.3° -100.6°   85.4°   H5                                                      
H6      -49.7°  110.2°  -57.1° -124.8°  -45.0°   H6                                               
H7       62.9° -101.5°   29.0° -138.6° -121.8°  -77.0°   H7                                        
H8     -114.1°   91.4° -134.7°   57.2°   45.7°   88.9° -163.5°   H8                                 
H9       74.9° -100.5°   38.3° -131.5° -135.9°  -90.9°  -14.4°  167.4°   H9                          
H10      81.3° -127.1°   17.3° -158.1°  116.2°   74.1°   26.0° -141.1°   28.1°   H10                  
H11     111.5°  112.2° -111.7°   80.4°   38.0°   72.7° -140.6°  -23.1° -146.8° -118.8°   H11           
H12     148.5° -118.2°   86.9°  -98.1°  132.1°  131.0°   86.0°   97.1°   73.6°   71.1°  -95.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3bk9a_ :    (THR23)  (VAL247)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d3bk9d_ :    (THR23)  (ASN212)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d2noxl_ :    (SER42)  (ASN229)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Cupriavidus metallidurans [TaxId: 119219]
 d3bk9e_ :    (THR23)  (THR213)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d3e08a_ :    (THR23)  (THR213)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d3e08e_ :    (THR23)  (THR213)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d3e08g_ :    (THR23)  (ARG246)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d2nw8a_ :    (THR23)  (ASN212)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d3bk9g_ :    (THR23)  (ASN212)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d2nw9a_ :    (THR23)  (ASN212)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
 d3e08f_ :    (THR23)  (ASN212)   [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.266