Protein Concepts Dictionary

Tableau information

Concept source:  d4ltwa_  amino acid (a.a.) range (THR27)(GLN232)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR27)   (LEU52) H1
	   (LEU52)   (LEU58) H2
	   (HIS59)   (SER70) H3
	   (SER70)   (LYS85) H4
	  (GLU102)  (SER108) H5
	  (TYR111)  (GLN128) H6
	  (THR130)  (SER144) H7
	  (GLN154)  (LYS174) H8
	  (SER179)  (SER195) H9
	  (HIS197)  (GLN213) H10
	  (GLN213)  (SER218) H11
	  (GLU223)  (GLN232) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      -82.7°   H2                                                                           
H3      147.8°  125.6°   H3                                                                    
H4      102.4° -172.7°  -51.3°   H4                                                             
H5      -96.4°   15.5° -110.4° -161.1°   H5                                                      
H6       45.7°  127.7° -103.0°  -58.3°  139.5°   H6                                               
H7      -92.3°   13.6°  113.4°  164.7°   -4.8°  134.8°   H7                                        
H8       99.4° -175.5°  -51.3°    9.7° -160.7°  -53.9° -162.1°   H8                                 
H9     -129.5°  -51.6°   82.7°  121.6°   42.9° -168.6°  -47.7°  127.9°   H9                          
H10    -123.2°  -58.9°   87.6°  113.8°   55.1° -150.5°  -59.5°  122.2°  -18.4°   H10                  
H11    -131.3° -129.3°   45.3°   43.5°  122.2°  -97.5° -127.0°   51.9°   79.4°  -70.4°   H11           
H12      76.6°   63.6° -100.9° -122.5°  -60.4°   91.7°   56.7° -112.9°  -96.9° -113.5°  146.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1i38a_ :   (GLN711)  (GLN902)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2oz7a_ :   (SER696)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
 d3l3xa_ :   (GLN711)  (GLN902)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
 d1e3ga_ :   (GLN711)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
 d4ltwa_ :    (THR27)  (GLN232)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Ancestral gene
 d1s0za_ :   (LEU224)  (VAL421)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Vitamin D nuclear receptor |Human (Homo sapiens) [TaxId: 9606]
 d1t65a_ :   (GLN711)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
 d1t74a_ :   (GLN711)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Chimpanzee (Pan troglodytes) [TaxId: 9598]
 d1xj7a_ :   (SER696)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2am9a_ :   (GLN711)  (GLN902)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
 d2ihqa_ :   (SER696)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2yhda_ :   (SER696)  (GLN902)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.123