Protein Concepts Dictionary

Tableau information

Concept source:  d2axua2  amino acid (a.a.) range (ASN73)(LYS288)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN73)   (PRO89) H1
	   (ASP93)  (ARG103) H2
	  (SER106)  (ASN124) H3
	  (PRO128)  (THR133) H4
	  (ASP137)  (LEU141) H5
	  (ILE151)  (LEU163) H6
	  (PRO164)  (MSE175) H7
	  (GLY183)  (ARG205) H8
	  (LEU207)  (ILE223) H9
	  (ASN229)  (THR247) H10
	  (ASN250)  (GLY268) H11
	  (GLU270)  (LYS288) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2     -139.4°   H2                                                                           
H3        2.8° -140.3°   H3                                                                    
H4     -133.5°    7.3° -134.7°   H4                                                             
H5     -141.9°   49.1° -144.7°  -49.2°   H5                                                      
H6       22.4° -125.0°   20.8° -121.4° -155.5°   H6                                               
H7     -153.0°   44.7° -155.7°   46.6°  -11.1° -163.8°   H7                                        
H8       36.3° -104.0°   36.6°  -99.1° -133.2°   24.4° -139.7°   H8                                 
H9     -136.8°   74.9° -138.1°   77.4°   31.8° -158.6°   30.8° -158.1°   H9                          
H10      58.0°  -81.5°   58.8°  -76.3° -113.1°   46.9° -117.7°   23.0° -143.9°   H10                  
H11     -98.1°  122.5°  -97.0°  128.2°   89.6° -108.4°   86.5° -132.2°   57.8° -155.2°   H11           
H12      64.4°  -75.8°   64.8°  -71.2° -112.4°   50.5° -115.2°   28.3° -144.2°   -8.7° -158.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2axua2 :    (ASN73)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2axub2 :    (GLU74)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2axug2 :    (ASN73)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2axvb2 :    (ILE82)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2axva2 :    (ASN88)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2axue2 :    (GLU74)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2aw6a2 :    (THR75)  (LYS286)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2grla2 :    (ASN88)  (LYS286)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2aw6b2 :    (THR75)  (LYS286)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2grma2 :    (ASN88)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2axuj2 :    (ASN73)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2axud2 :    (THR75)  (LYS288)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |PrgX |Enterococcus faecalis [TaxId: 1351]
 d2axza2 :    (THR75)  (GLY268)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118