Protein Concepts Dictionary

Tableau information

Concept source:  d3rn9a_  amino acid (a.a.) range (PRO87)(LYS361)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO87)  (ARG113) H1
	  (ALA120)  (TYR146) H2
	  (SER152)  (ALA158) H3
	  (TRP167)  (THR182) H4
	  (SER185)  (GLY216) H5
	  (HIS218)  (GLU231) H6
	  (ARG233)  (GLY249) H7
	  (ASP252)  (TYR279) H8
	  (SER289)  (GLY310) H9
	  (TRP317)  (ASP323) H10
	  (THR327)  (TRP338) H11
	  (PRO352)  (LYS361) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2     -148.3°   H2                                                                           
H3       15.4° -163.1°   H3                                                                    
H4      -26.7° -161.4°  -14.6°   H4                                                             
H5     -153.9°   35.7° -150.4° -135.9°   H5                                                      
H6       25.4° -170.8°   13.0°   22.0° -153.4°   H6                                               
H7       52.0° -146.1°   44.0°   52.2° -146.5°  -31.4°   H7                                        
H8     -158.0°   17.2° -165.3° -152.5°  -18.6° -172.0° -149.4°   H8                                 
H9      -18.4° -166.0°   -3.0°   13.1°  148.9°  -11.3°  -42.7°  165.3°   H9                          
H10    -156.4°   15.8° -164.8° -152.8°  -19.9° -173.3° -150.6°   -1.9°  165.1°   H10                  
H11     110.4°  -38.4°  125.7° -132.9°  -70.2°  133.3°  133.0°  -53.9°  128.8°   52.1°   H11           
H12     -47.3° -163.6°   33.0°   33.3°  136.3°  -22.1°  -25.9°  151.8°  -30.3° -153.6° -153.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ge8d_ :    (PRO87)  (LYS361)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3rnaa_ :   (ALA101)  (LYS361)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3rnea_ :    (PRO87)  (TRP343)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d1t0qa_ :   (LEU102)  (LYS361)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas stutzeri [TaxId: 316]
 d3n1za_ :    (PRO87)  (LYS361)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3rn9a_ :    (PRO87)  (LYS361)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3n1xa_ :    (PRO87)  (TRP343)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25