Protein Concepts Dictionary

Tableau information

Concept source:  d1tjwc_  amino acid (a.a.) range (ALA31)(THR267)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA31)   (SER37) H1
	   (SER37)   (GLY55) H2
	   (THR58)   (GLY79) H3
	   (ASP89)  (LEU101) H4
	  (ASP104)  (HIS110) H5
	  (SER114)  (GLU152) H6
	  (TRP171)  (ASN197) H7
	  (ASN197)  (GLY202) E8
	  (ARG215)  (GLU221) H9
	  (ALA225)  (ASN230) E10
	  (ASN230)  (SER236) H11
	  (ARG238)  (THR267) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      -59.1°   H2                                                                           
H3     -118.5° -177.4°   H3                                                                    
H4      -58.8°  -61.6°  118.5°   H4                                                             
H5       92.0°   86.4°  -92.8°  144.1°   H5                                                      
H6       76.6°  130.0°  -47.4°  115.0°   72.4°   H6                                               
H7      -85.0°  -32.5°  149.9°  -55.6°  105.6° -161.3°   H7                                        
E8     -107.0°  -55.7°  126.9°  -64.1° -112.2° -173.7°   23.6°   E8                                 
H9       84.8°  142.0°  -36.1°   91.0° -107.8°  -36.7°  145.3°  137.5°   H9                          
E10    -135.4°  -78.2°  103.9° -113.0°  -71.9°  131.8°  -61.5°  -48.9°  139.4°   E10                  
H11     120.2° -159.2°   22.2°   99.4°  114.2°   63.7° -130.6° -110.0°   37.2°  104.2°   H11           
H12      98.6°  156.2°  -21.2°  116.2°   86.3°   26.7° -167.5° -147.3°  -25.2°  120.6°  -37.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1k7wa_ :    (ALA31)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1k62a_ :    (ALA29)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Human (Homo sapiens) [TaxId: 9606]
 d1hy1c_ :    (GLN32)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1k62b_ :    (ALA29)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Human (Homo sapiens) [TaxId: 9606]
 d1tjva_ :    (ALA31)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1k7wb_ :    (GLN34)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1tjua_ :    (PRO21)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1k7wc_ :    (ILE30)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1tjwc_ :    (ALA31)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1hy0a_ :    (SER27)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1auwa_ :    (ALA29)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1tjub_ :    (PRO21)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1u15c_ :    (ILE20)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1tjvc_ :    (ASP33)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1u15b_ :    (ALA29)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1tjwb_ :    (ILE30)  (THR267)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1hy1a_ :    (GLN32)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
 d1u15a_ :    (ALA29)  (THR265)   [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.127