Protein Concepts Dictionary

Tableau information

Concept source:  d2awzb_  amino acid (a.a.) range (ALA25)(GLY192)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA25)   (LEU31) H1
	   (HIS33)   (TYR38) H2
	   (THR41)   (LYS51) H3
	   (ASP62)   (ALA75) H4
	   (SER84)   (THR92) H5
	  (GLY104)  (LEU111) H6
	  (SER112)  (GLU128) H7
	  (ILE134)  (ALA140) E8
	  (ARG158)  (PRO163) E9
	  (ASP164)  (ALA174) H10
	  (LEU175)  (THR181) H11
	  (GLY188)  (GLY192) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2       94.3°   H2                                                                           
H3       43.6°  -51.3°   H3                                                                    
H4      124.4°  -88.6° -121.0°   H4                                                             
H5      -80.5° -152.7°  115.3°  116.5°   H5                                                      
H6       87.2°   65.8°   77.6°  -44.4° -139.8°   H6                                               
H7      -50.3°   48.6°  -11.5° -128.0°  112.8°  -86.6°   H7                                        
E8      -75.8° -159.9°  114.6°  111.4°   10.3° -129.8° -114.4°   E8                                 
E9      124.1°  -40.0°  -87.5°  -50.9° -155.3°   50.5°   87.6°  157.8°   E9                          
H10      51.7°   75.5°   55.4°  -75.8°  119.0°  -35.6°  -66.8° -109.6°   80.9°   H10                  
H11      26.7°  118.9°   69.9°  111.1°   63.8°  -88.9°   77.0°  -56.1°  137.6°  -56.7°   H11           
H12    -109.6° -138.8°  135.5° -103.5°  -29.9° -145.2°  127.8°   37.5° -126.1° -145.5°  -93.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2whoa_ :    (ASN24)  (GLY192)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
 d1gx5a_ :    (ALA25)  (SER196)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
 d4khra_ :    (ALA25)  (TYR191)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis c virus subtype 1a [TaxId: 31646]
 d1nb4a_ :    (ASN24)  (GLY192)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
 d4khma_ :    (ALA25)  (GLY192)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis c virus subtype 1a [TaxId: 31646]
 d2fvca_ :    (ASN24)  (GLY192)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
 d3i5ka_ :    (PRO25)  (ALA209)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis c virus jfh-1 [TaxId: 356411]
 d2xi2a_ :    (ALA25)  (TYR191)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
 d3frza_ :    (ALA25)  (GLY192)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
 d3co9a_ :    (LEU26)  (GLY192)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus isolate bk [TaxId: 11105]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8