Tableau information
Concept source: d3nvra_ amino acid (a.a.) range (GLY3)(LYS179)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY3) (LEU16) H1
(GLY18) (SER28) H2
(ASP45) (THR59) H3
(VAL63) (GLN73) H4
(ASN74) (PRO83) H5
(ARG90) (MET98) H6
(MET98) (LYS110) H7
(GLY111) (PRO121) E8
(ASP125) (SER133) E9
(MET137) (LYS153) H10
(LYS153) (GLU162) E11
(SER170) (LYS179) E12
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 139.2° H2
H3 4.4° 135.8° H3
H4 100.8° -117.4° 104.9° H4
H5 127.4° -83.5° 131.8° -36.5° H5
H6 -134.2° 5.1° -131.0° 121.3° 86.6° H6
H7 -121.8° -37.9° 121.6° 104.1° 68.7° -35.9° H7
E8 70.1° 136.1° -70.6° -68.0° -101.6° -139.4° -167.6° E8
E9 -110.4° 34.1° -108.5° 127.2° 91.7° 29.5° 23.1° 162.8° E9
H10 70.0° -148.8° 73.9° -31.5° -66.0° 152.5° 126.3° -51.4° 145.8° H10
E11 -112.1° 40.0° -107.7° 143.1° 119.6° -39.1° -72.7° 107.4° -55.8° 157.7° E11
E12 61.6° -158.8° 64.6° -46.3° -82.7° -163.9° 145.3° -33.8° 162.1° -19.1° 141.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3sj5a_ : (LYS2) (LYS179) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3sj5b_ : (GLY3) (LYS179) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3tf0a_ : (GLY3) (ASN180) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3nvrb_ : (GLY3) (LYS166) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3m0ba_ : (GLY3) (LYS179) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |automated matches |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3nvra_ : (GLY3) (LYS179) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d1u55a_ : (GLY3) (LYS179) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d1u4ha_ : (GLY3) (ASP167) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3eeea_ : (GLY3) (LYS179) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
d3nvua_ : (GLY3) (ASP167) [view usage] : d.278.1.1 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |H-NOX domain |Methyl-accepting chemotaxis protein |Thermoanaerobacter tengcongensis [TaxId: 119072]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.278