Protein Concepts Dictionary

Tableau information

Concept source:  d3koua_  amino acid (a.a.) range (ASP50)(ARG277)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHEHHHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP50)   (ARG67) H1
	   (CYS75)   (ALA85) H2
	  (ASN100)  (ALA106) H3
	  (GLN114)  (TRP118) E4
	  (THR121)  (ARG133) H5
	  (THR140)  (ALA146) H6
	  (TYR176)  (ALA192) H7
	  (ASN194)  (VAL199) E8
	  (VAL226)  (THR236) E9
	  (GLY246)  (ASN260) H10
	  (LYS262)  (ASP267) E11
	  (SER270)  (ARG277) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      139.6°   H2                                                                           
H3      -25.3° -158.5°   H3                                                                    
E4      142.5°  -29.1°  141.2°   E4                                                             
H5       33.9°  161.8°  -28.6°  168.7°   H5                                                      
H6      141.3°  -64.3°  119.6°   39.5° -132.8°   H6                                               
H7      -18.1°  124.7°  -43.2° -138.0°   43.5° -156.2°   H7                                        
E8      125.2°  -62.4°  111.4°  -33.3°  135.5°  -24.6° -134.5°   E8                                 
E9      111.7°  -77.8°   95.8°  -48.8°  119.9°  -32.4°  124.0°  -15.8°   E9                          
H10     -69.4°  110.7°  -80.0°  138.3°  -52.9°  140.7°  -60.9°  164.6°  166.2°   H10                  
E11     103.1°  -84.6°   87.6°  -56.0°  112.7°  -40.5°  115.8°  -23.8°   -8.6°  163.7°   E11           
H12     -46.2°  143.5°  -48.5° -170.2°  -20.2° -140.2°   47.9° -152.8° -138.3°  -33.0°  131.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3koua_ :    (ASP50)  (ARG277)   [view usage] : c.23.14.0 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1zvmc_ :    (ARG58)  (ASN290)   [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Human (Homo sapiens) [TaxId: 9606]
 d3ghha_ :    (ASP50)  (ARG277)   [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Cow (Bos taurus) [TaxId: 9913]
 d3gh3a_ :    (ASP50)  (GLN276)   [view usage] : c.23.14.0 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3p5sa_ :    (ASP50)  (SER278)   [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23