Protein Concepts Dictionary

Tableau information

Concept source:  d4knwc_  amino acid (a.a.) range (ILE70)(ILE242)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE70)   (GLY87) H1
	   (ARG92)  (MET110) H2
	  (ALA113)  (VAL127) H3
	  (ARG128)  (ASN134) E4
	  (ASP136)  (ALA146) H5
	  (ALA155)  (GLY159) E6
	  (PRO169)  (GLY180) H7
	  (CYS186)  (ASP191) E8
	  (THR192)  (GLY204) H9
	  (THR208)  (ASN214) E10
	  (HIS226)  (SER230) E11
	  (SER231)  (ILE242) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      120.3°   H2                                                                           
H3      150.6°  -64.5°   H3                                                                    
E4       38.3°  155.9°  126.7°   E4                                                             
H5     -102.5°  -41.1°  -97.4°  135.9°   H5                                                      
E6       44.3°  145.4°  113.5°  -17.4°  146.8°   E6                                               
H7     -145.0°  -48.6°  -62.2°  153.5°  -45.2°  164.4°   H7                                        
E8      -20.2°  120.3°  170.4°  -45.4°   90.7°  -57.6°  127.4°   E8                                 
H9      146.5°  -64.8°    4.3°  124.7°  -99.3°  110.6°  -65.8° -166.5°   H9                          
E10     -31.9°  104.6°  168.8°  -62.3°   74.0°  -73.7°  113.3°  -16.9° -167.2°   E10                  
E11     -60.4°   94.1°  147.9°  -82.7°   54.6°  -97.8°   85.7°  -41.7°  151.3°  -29.2°   E11           
H12     134.9°  -52.1°   22.1°  129.0°  -91.6°  112.1°  -69.8°  153.3°  -19.1°  148.2°  146.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2no4b_ :    (PHE61)  (ALA224)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Burkholderia cepacia [TaxId: 292]
 d2w11a_ :    (PHE42)  (TYR200)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d4knwc_ :    (ILE70)  (ILE242)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2w11b_ :    (GLU59)  (TYR200)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d2w43b_ :    (GLU41)  (TYR200)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d4g9ba_ :    (SER48)  (THR208)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4c4ta_ :    (ARG49)  (LEU217)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |beta-Phosphoglucomutase |Lactococcus lactis [TaxId: 1358]
 d4knwa_ :    (ILE70)  (ILE242)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2no4a_ :    (PHE61)  (ALA224)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Burkholderia cepacia [TaxId: 292]
 d1o03a_ :    (SER48)  (LYS219)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |beta-Phosphoglucomutase |Lactococcus lactis [TaxId: 1358]
 d4knva_ :    (ILE68)  (ILE240)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2w43a_ :    (PHE42)  (LYS201)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d4knwb_ :    (CYS69)  (ILE242)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3umcc_ :    (HIS63)  (SER232)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d3umgc_ :    (ASP96)  (ALA248)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d3i76c_ :    (THR69)  (ASN228)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3umcb_ :    (LEU64)  (SER232)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d3umca_ :    (LEU64)  (ALA231)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108