Protein Concepts Dictionary

Tableau information

Concept source:  d1nisa1  amino acid (a.a.) range (GLY574)(THR730)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY574)  (PHE579) H1
	  (LEU583)  (LEU590) H2
	  (VAL616)  (GLY627) H3
	  (ARG629)  (ASP635) E4
	  (GLU645)  (GLY655) H5
	  (ARG657)  (LYS662) E6
	  (ARG666)  (GLY676) H7
	  (GLY676)  (PHE682) E8
	  (ASP684)  (ASN689) H9
	  (LYS696)  (GLY701) E10
	  (LEU711)  (HIS717) E11
	  (THR721)  (THR730) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2     -152.1°   H2                                                                           
H3      -34.7°  117.4°   H3                                                                    
E4     -146.3°   51.0°  144.8°   E4                                                             
H5       65.1°  -93.2°  -42.5°  144.0°   H5                                                      
E6     -147.8°   38.9°  131.5°  -16.8°  129.1°   E6                                               
H7       28.4° -128.7°  -24.4° -168.9°  -36.8° -155.1°   H7                                        
E8     -145.8°   20.2°  115.5°  -40.3°  104.9°  -24.2° -134.8°   E8                                 
H9       97.6°  -80.3°   92.0° -114.5°   52.1° -113.7°   74.7° -100.5°   H9                          
E10     -56.3°  119.9°  -64.1°   92.0° -106.5°   91.7°  -79.0°  100.4°  153.5°   E10                  
E11     117.3°  -55.6°  100.1°  -96.4°   57.7°  -91.3°   90.4°  -75.7°   25.0°  160.7°   E11           
E12     -74.8°  126.3° -103.1°   75.4° -139.7°   87.9° -102.8°  110.8° -134.0°  -49.7°  149.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b0ja1 :   (GLY574)  (THR730)   [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Aconitase A, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1acoa1 :   (GLY574)  (THR724)   [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Aconitase A, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d3snpa2 :   (SER708)  (PHE865)   [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2b3xa1 :   (SER708)  (PHE865)   [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |ron-responsive element binding protein 1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1c96a1 :   (GLY574)  (THR730)   [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Aconitase A, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d1nisa1 :   (GLY574)  (THR730)   [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Aconitase A, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.8