Protein Concepts Dictionary

Tableau information

Concept source:  d1uu0a_  amino acid (a.a.) range (PRO34)(LYS190)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO34)   (LEU45) H1
	   (ASN46)   (ILE52) H2
	   (ASP58)   (ASP70) H3
	   (VAL79)   (ASN83) E4
	   (GLY84)   (PHE96) H5
	   (ASP97)  (PHE102) E6
	  (CYS108)  (GLY117) H7
	  (LYS119)  (PRO124) E8
	  (GLY139)  (PRO145) E9
	  (GLU156)  (GLY167) H10
	  (PHE169)  (ALA175) E11
	  (TYR184)  (LYS190) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2       73.2°   H2                                                                           
H3      146.8° -106.0°   H3                                                                    
E4      -96.5°  -80.8°  116.3°   E4                                                             
H5       66.9°   28.6°  -96.2°  109.1°   H5                                                      
E6      163.5° -122.8°   38.9°  -83.4°  128.8°   E6                                               
H7      -32.3°  -42.5° -143.3°   81.8°  -47.1° -160.8°   H7                                        
E8      165.2° -119.0°   26.8°  -93.9°  119.2°  -12.1° -161.4°   E8                                 
E9     -136.7° -142.3°   62.9°  -74.2° -156.4°  -27.7°  152.1°  -37.9°   E9                          
H10     -34.8°   40.7° -127.8°   98.6°   33.3°  161.6°  -17.9°  152.5° -169.3°   H10                  
E11    -118.5° -142.7°   82.9°  -63.3° -170.4°  -47.0°  133.0°  -57.8°  -20.1° -149.2°   E11           
H12      47.3°   56.4° -103.6°  128.2°   31.5°  142.5°  -47.3°  130.4°  157.2°  -29.8° -157.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uu1a_ :    (PRO34)  (GLY181)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1h1cd_ :    (PRO34)  (GLY181)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1uu2a_ :    (PRO34)  (GLY181)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d2f8ja_ :    (PRO34)  (LYS190)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1uu0c_ :    (PRO34)  (GLY181)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1uu0b_ :    (PRO34)  (LYS190)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1uu0a_ :    (PRO34)  (LYS190)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d2f8jb_ :    (PRO34)  (LYS190)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1h1cb_ :    (PRO34)  (LYS190)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d3hdob_ :    (PRO40)  (HIS201)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
 d1h1cc_ :    (PRO34)  (LYS190)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
 d1h1ca_ :    (PRO34)  (PHE179)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67