Protein Concepts Dictionary

Tableau information

Concept source:  d4bofe_  amino acid (a.a.) range (LEU36)(MET180)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHEHHHHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU36)   (LEU40) H1
	   (LEU47)   (GLY65) H2
	   (GLY65)   (TYR70) E3
	   (TYR70)   (SER78) H4
	   (THR81)   (ALA96) H5
	  (ARG101)  (ILE114) H6
	  (ASN117)  (GLY127) H7
	  (GLN129)  (PRO134) H8
	  (GLY142)  (VAL147) H9
	  (MET158)  (THR164) H10
	  (PRO167)  (GLY172) E11
	  (GLY174)  (MET180) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      -23.9°   H2                                                                           
E3      126.9°  144.1°   E3                                                                    
H4       78.0°  -84.4°  -61.9°   H4                                                             
H5      114.6°  129.9°  -68.6°  123.5°   H5                                                      
H6      -70.6°  -47.0° -137.3°  -90.3°  146.2°   H6                                               
H7      108.5°  125.1°   69.5°  120.5°    6.8°  148.8°   H7                                        
H8      105.0° -101.1°  -57.7°  -33.5° -125.4°   81.0° -127.1°   H8                                 
H9      122.2°  111.8° -103.9° -158.9°   56.7°  -91.5°   62.0° -126.4°   H9                          
H10     -35.7°   15.6°  159.7°   98.8°  123.8°  -41.5°  120.7°  110.4°  -96.4°   H10                  
E11     -20.0°    4.0°  142.1°   83.8°  127.2°  -51.0° -122.1°  102.4° -113.3°  -17.9°   E11           
E12     141.0°  161.6°  -42.1° -103.9°  -32.3°  147.0°   36.6°  -94.5°   64.9°  154.9°  158.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bofa_ :    (LEU36)  (ASN178)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
 d4bofe_ :    (LEU36)  (MET180)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
 d4bofb_ :    (LEU36)  (ASN178)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
 d4bofc_ :    (LEU36)  (MET180)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.126