Protein Concepts Dictionary

Tableau information

Concept source:  d3bohb_  amino acid (a.a.) range (TYR74)(PRO222)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHEHHHEEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR74)   (ARG80) H1
	   (THR84)   (GLY99) H2
	  (SER103)  (ASP107) E3
	  (ASP111)  (GLY116) H4
	  (GLY116)  (GLY124) H5
	  (ALA138)  (GLY149) H6
	  (VAL151)  (GLY157) E7
	  (VAL163)  (LEU168) E8
	  (PHE183)  (TRP188) E9
	  (TRP188)  (GLY194) H10
	  (VAL197)  (GLY212) H11
	  (LYS216)  (PRO222) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      121.5°   H2                                                                           
E3     -108.3°  114.2°   E3                                                                    
H4      -64.8°   68.6°  101.7°   H4                                                             
H5       31.2°  150.0°  -92.7°  -93.9°   H5                                                      
H6      112.1°  -41.7° -139.6°   96.1°  122.1°   H6                                               
E7     -104.7°   95.0°  -28.6°   74.8° -104.0° -133.7°   E7                                        
E8      -68.5°   69.5° -176.3°  -78.7°  -83.6°   43.7°  152.8°   E8                                 
E9      -64.0°   70.1° -171.8°  -73.0°  -81.6°   48.3°  147.6°   -6.3°   E9                          
H10     -61.4°  104.6° -137.5° -108.3°  -56.4°   66.3° -159.9°  -39.6°   42.5°   H10                  
H11     115.3° -111.3°    8.2° -108.1°   97.1° -132.2°  -33.6°  173.0°  178.4°  135.9°   H11           
E12     -96.7°   42.4°  153.8°  -81.6° -113.2°   17.7°  137.0°  -29.9°  -33.1°  -62.3°  147.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3bohb_ :    (TYR74)  (PRO222)   [view usage] : c.154.1.1 |CdCA1 repeat-like |CdCA1 repeat-like |CdCA1 repeat-like |Cadmium-specific carbonic anhydrase CdCA1 |Thalassiosira weissflogii [TaxId: 67004]
 d3boba1 :   (TYR284)  (PRO432)   [view usage] : c.154.1.1 |CdCA1 repeat-like |CdCA1 repeat-like |CdCA1 repeat-like |Cadmium-specific carbonic anhydrase CdCA1 |Thalassiosira weissflogii [TaxId: 67004]
 d3uk8a_ :   (TYR494)  (PRO642)   [view usage] : c.154.1.1 |CdCA1 repeat-like |CdCA1 repeat-like |CdCA1 repeat-like |Cadmium-specific carbonic anhydrase CdCA1 |Thalassiosira weissflogii [TaxId: 67004]
 d3uk8b_ :   (TYR494)  (PRO642)   [view usage] : c.154.1.1 |CdCA1 repeat-like |CdCA1 repeat-like |CdCA1 repeat-like |Cadmium-specific carbonic anhydrase CdCA1 |Thalassiosira weissflogii [TaxId: 67004]
 d3boha1 :    (TYR74)  (PRO222)   [view usage] : c.154.1.1 |CdCA1 repeat-like |CdCA1 repeat-like |CdCA1 repeat-like |Cadmium-specific carbonic anhydrase CdCA1 |Thalassiosira weissflogii [TaxId: 67004]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.154