Tableau information
Concept source: d4pgpb_ amino acid (a.a.) range (THR177)(ALA337)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: HHEHEEHHEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR177) (GLY186) H1
(PRO193) (GLY204) H2
(LYS207) (THR211) E3
(VAL215) (ASN220) H4
(GLY226) (ARG230) E5
(GLN233) (ASN243) E6
(ASN243) (ARG249) H7
(SER251) (GLY289) H8
(GLY289) (LEU295) E9
(GLU297) (GLN308) H10
(LEU310) (GLY322) H11
(PRO325) (ALA337) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -37.2° H2
E3 128.1° -157.3° E3
H4 -111.1° -74.6° 119.3° H4
E5 88.3° 125.5° -46.3° 157.5° E5
E6 -163.4° 134.5° -64.6° 60.7° -97.5° E6
H7 -138.2° 141.4° -28.4° 97.1° -73.5° 58.3° H7
H8 -36.4° -18.7° -139.0° 83.2° -119.1° 143.1° 125.1° H8
E9 67.8° 102.6° -74.8° 149.4° -29.2° 111.1° -102.5° -103.8° E9
H10 122.2° 128.0° -73.0° 87.5° -72.1° 46.7° -88.1° 146.3° -70.0° H10
H11 143.6° 141.7° -61.0° 80.1° -77.4° 27.0° -69.3° 159.4° -85.0° 21.5° H11
H12 -91.0° -88.5° 72.7° 96.5° -94.3° 103.9° 54.5° -70.9° -114.1° 142.6° 122.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4napb_ : (THR177) (GLN338) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio alaskensis [TaxId: 207559]
d4pgnb_ : (THR177) (TYR339) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio desulfuricans [TaxId: 207559]
d4pgnc_ : (THR177) (GLY340) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio desulfuricans [TaxId: 207559]
d4napa_ : (THR177) (ALA337) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio alaskensis [TaxId: 207559]
d4pgna_ : (GLY176) (TYR339) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio desulfuricans [TaxId: 207559]
d4pgpb_ : (THR177) (ALA337) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio desulfuricans [TaxId: 207559]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94