Protein Concepts Dictionary

Tableau information

Concept source:  d4hrwb_  amino acid (a.a.) range (PRO10)(CYS180)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO10)   (ASN18) H1
	   (ALA25)   (ASP44) H2
	   (PRO47)   (VAL52) E3
	   (ALA62)   (ASN66) E4
	   (HIS77)   (ASP91) H5
	  (ALA102)  (SER108) E6
	  (CYS112)  (SER122) H7
	  (ARG125)  (ALA130) E8
	  (SER133)  (GLY140) H9
	  (TRP150)  (GLY158) H10
	  (GLY158)  (GLY164) E11
	  (LEU166)  (CYS180) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2     -152.9°   H2                                                                           
E3      -16.9°  136.9°   E3                                                                    
E4      158.5°  -44.9°  158.3°   E4                                                             
H5      -41.1°  112.1°  -28.7°  154.6°   H5                                                      
E6      153.8°  -50.4°  169.6°  -30.8°  150.4°   E6                                               
H7      -22.1°  130.8°   -9.9°  164.4°   19.6°  164.0°   H7                                        
E8      135.4°  -65.5°  150.4°  -49.1°  141.1°  -19.3°  146.5°   E8                                 
H9     -164.5°  -13.2° -149.7°  -36.0°  123.5°   37.3°  142.8°   52.8°   H9                          
H10     -27.7°  125.1°  -14.2°  161.3°   14.6° -163.1°   -5.6° -148.0°  137.2°   H10                  
E11     127.8°  -71.3°  142.2°  -57.3°  134.3°  -27.4°  138.2°   -8.3°   59.0° -140.0°   E11           
H12    -158.0°    5.4°  141.7°  -39.6°  117.4°  -46.1°  135.9°  -62.1°   -9.4°  130.3°  -68.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2g84b_ :    (PRO11)  (CYS180)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Putative deaminase NE0047 |Nitrosomonas europaea [TaxId: 915]
 d4lcnb_ :    (PRO11)  (CYS180)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Putative deaminase NE0047 |Nitrosomonas europaea [TaxId: 915]
 d4hrwa_ :    (PRO11)  (ALA179)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Putative deaminase NE0047 |Nitrosomonas europaea [TaxId: 915]
 d2g84a1 :    (PRO11)  (CYS180)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Putative deaminase NE0047 |Nitrosomonas europaea [TaxId: 915]
 d4hrwb_ :    (PRO10)  (CYS180)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Putative deaminase NE0047 |Nitrosomonas europaea [TaxId: 915]
 d4ld2a_ :    (PRO11)  (ASN181)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Putative deaminase NE0047 |Nitrosomonas europaea [TaxId: 915]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.97