Protein Concepts Dictionary

Tableau information

Concept source:  d4r9kc_  amino acid (a.a.) range (THR22)(VAL143)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR22)   (LEU35) H1
	   (ASP39)   (LYS45) H2
	   (ASP50)   (ASN55) E3
	   (PRO59)   (GLY63) E4
	   (ARG64)   (LYS76) H5
	   (VAL77)   (PHE86) E6
	   (PHE86)   (LYS92) E7
	   (GLY93)   (GLU98) E8
	   (ARG99)  (ALA105) E9
	  (GLY109)  (THR123) E10
	  (THR128)  (PHE134) E11
	  (ARG137)  (VAL143) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2      175.2°   H2                                                                           
E3      -55.0°  129.7°   E3                                                                    
E4      114.1°  -62.1°  154.8°   E4                                                             
H5      -40.2°  144.4°   25.1° -131.1°   H5                                                      
E6     -143.5°   40.7°   95.7°  -82.7°  103.9°   E6                                               
E7      134.7°  -40.9°  151.1°  -53.8°  172.6°  -81.7°   E7                                        
E8      -49.8°  135.0°  -12.7°  142.2°   13.3°   96.6°  163.7°   E8                                 
E9       18.6° -157.1°  -69.9°  105.8°   58.5°  162.1° -116.2°  -66.9°   E9                          
E10     150.9°  -24.4°  151.7°  -47.6° -167.7°  -64.1°  -19.2° -159.2°  133.1°   E10                  
E11     -61.3°  123.4°    7.7°  160.7°   32.7°   91.9°  143.8°  -20.0°  -74.9°  144.2°   E11           
H12     -25.3°  155.7°   56.3°  103.5°   32.5°  122.5° -147.0°   45.7°  -40.7° -151.0°   64.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4r9kb_ :    (THR22)  (VAL143)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d4r9la_ :    (THR22)  (ALA142)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d4r9lb_ :    (THR22)  (VAL143)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d4r9ka_ :    (THR22)  (ALA142)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d1nwwa_ :    (THR22)  (VAL143)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d4r9kc_ :    (THR22)  (VAL143)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d4r9lc_ :    (THR22)  (VAL143)   [view usage] : d.17.4.8 |Cystatin-like |NTF2-like |Limonene-1,2-epoxide hydrolase-like |Limonene-1,2-epoxide hydrolase |Rhodococcus erythropolis [TaxId: 1833]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.17