Protein Concepts Dictionary

Tableau information

Concept source:  d4alwa_  amino acid (a.a.) range (LEU129)(HIS305)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HHEEEHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU129)  (GLU135) H1
	  (GLU141)  (GLY162) H2
	  (ILE173)  (LEU177) E3
	  (GLY180)  (LEU184) E4
	  (THR196)  (ASP200) E5
	  (PRO209)  (ARG214) H6
	  (HIS216)  (ARG221) E7
	  (ARG221)  (GLY238) H8
	  (ASP245)  (GLY251) H9
	  (SER260)  (ALA272) H10
	  (THR280)  (HIS287) H11
	  (LEU295)  (HIS305) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
H2     -168.0°   H2                                                                           
E3       64.7°  127.2°   E3                                                                    
E4     -129.8°  -38.6°  158.5°   E4                                                             
E5      -69.5°  107.9°   85.5°   86.2°   E5                                                      
H6     -105.7°   64.1° -145.6°   28.1°  -60.8°   H6                                               
E7       94.8°  -95.6°   45.4° -133.0°  128.8°  159.6°   E7                                        
H8       27.2°  160.9°  -43.1°  142.1°  -59.4° -114.1°  -84.1°   H8                                 
H9       96.2°  -85.8°   89.3° -103.0°  165.7° -125.0°   51.1°  108.2°   H9                          
H10    -139.7°   29.2°  149.1°  -10.6°  -88.3°  -35.2°  124.7° -147.2° -102.7°   H10                  
H11      31.6° -159.8°  -36.2°  161.4°  -85.0°  135.8°  -64.2°  -25.5°   83.0° -171.0°   H11           
H12      37.2° -139.1°  -73.1°  108.7°  -32.4°  -80.6°  117.1°   33.5°  133.4° -114.5°   57.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ywva_ :   (LEU129)  (HIS305)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Proto-oncogene serine/threonine-protein kinase Pim-1 |Human (Homo sapiens) [TaxId: 9606]
 d1yxuc_ :   (GLU141)  (ILE302)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Proto-oncogene serine/threonine-protein kinase Pim-1 |Human (Homo sapiens) [TaxId: 9606]
 d1xwsa_ :   (ASP128)  (ILE302)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Proto-oncogene serine/threonine-protein kinase Pim-1 |Human (Homo sapiens) [TaxId: 9606]
 d3r02a_ :   (LEU129)  (HIS305)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Proto-oncogene serine/threonine-protein kinase Pim-1 |Human (Homo sapiens) [TaxId: 9606]
 d2bzja_ :   (LEU129)  (GLN291)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4alwa_ :   (LEU129)  (HIS305)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xqza_ :   (ASP128)  (HIS305)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Proto-oncogene serine/threonine-protein kinase Pim-1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144