Protein Concepts Dictionary

Tableau information

Concept source:  d1k6aa_  amino acid (a.a.) range (ALA64)(GLY217)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA64)   (ASN76) H1
	   (LEU79)   (THR84) E2
	   (SER93)   (ILE98) H3
	  (LYS101)  (THR113) H4
	  (THR114)  (LYS120) H5
	  (ARG124)  (VAL129) E6
	  (THR142)  (GLY149) H7
	  (ILE153)  (ALA163) H8
	  (ASN166)  (ASN175) E9
	  (LYS183)  (GLY198) H10
	  (GLY203)  (HIS209) E11
	  (SER211)  (GLY217) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2      162.1°   E2                                                                           
H3     -110.3°  -55.5°   H3                                                                    
H4      -34.1°  162.6° -141.6°   H4                                                             
H5      -29.1°  167.7° -127.6°   15.5°   H5                                                      
E6      145.8°  -18.5°  -54.2°  160.0°  173.5°   E6                                               
H7     -108.8°   64.0°   26.8° -128.5° -113.0°  -71.2°   H7                                        
H8      -54.1°  141.2°  124.5°  -34.6°  -26.5°  159.7°  101.0°   H8                                 
E9      112.9°  -59.4°  -86.8°  116.7°  130.0°  -43.9° -111.0°  148.0°   E9                          
H10     -84.4°   98.1°   68.3°  -88.8°  -74.5°  111.1°   42.9°  -58.1°  153.8°   H10                  
E11     102.4°  -80.5° -122.8°   88.0°  103.5°  -72.3° -143.5°  112.7°  -36.7°  162.2°   E11           
H12     -55.9°  113.0°   58.1°  -83.5°  -69.8°  111.0°   53.3°  -75.8°  124.2°  -48.8° -147.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bs0a_ :    (ALA64)  (GLY217)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]
 d3o2la_ :    (ALA64)  (GLY217)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]
 d1i1wa_ :    (ALA64)  (SER217)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
 d1k6aa_ :    (ALA64)  (GLY217)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
 d3nyda_ :    (ALA64)  (GLY217)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]
 d3nydb_ :    (ALA64)  (SER227)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1