Protein Concepts Dictionary

Tableau information

Concept source:  d3r25b2  amino acid (a.a.) range (GLN180)(HIS328)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN180)  (LYS197) H1
	  (HIS203)  (HIS209) E2
	  (PHE213)  (VAL224) H3
	  (VAL224)  (LYS228) H4
	  (LEU244)  (GLN250) H5
	  (VAL253)  (GLY258) E6
	  (PRO264)  (ARG274) H7
	  (ASP277)  (HIS282) E8
	  (HIS282)  (GLY287) H9
	  (PRO291)  (PHE302) H10
	  (ARG305)  (PRO311) E11
	  (THR315)  (HIS328) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2      173.0°   E2                                                                           
H3      -13.4°  171.1°   H3                                                                    
H4       30.5° -145.6°  -43.1°   H4                                                             
H5      -32.4°  154.4°  -20.7°  -57.1°   H5                                                      
E6      120.6°  -52.8°  133.4°   96.0° -152.6°   E6                                               
H7      -49.8°  137.2°  -41.0°  -65.8°  -21.9° -155.5°   H7                                        
E8      115.0°  -58.0°  124.0°  101.5°  143.8°  -26.2° -164.8°   E8                                 
H9     -130.1°   48.7° -139.6° -100.7° -136.3°   46.7° -118.0°   71.3°   H9                          
H10     -71.2°  115.9°  -60.9°  -87.2°  -40.3°  157.2°  -22.1°  170.7°  110.6°   H10                  
E11     113.2°  -61.7°  115.0°  116.3°  127.5°  -55.9°  145.9°  -30.9°   95.6°  141.2°   E11           
H12     -58.6°  126.6°  -56.8°  -57.5°  -45.2°  127.9°  -28.7°  150.6°   91.3°  -38.2° -171.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3twaa2 :   (ASP199)  (SER347)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Salmonella enterica [TaxId: 550537]
 d4hnla2 :   (ASP177)  (HIS326)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Enterococcus gallinarum [TaxId: 565653]
 d1wuea1 :  (ARG1166) (PHE1305)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |N-acylamino acid racemase |Enterococcus faecalis [TaxId: 1351]
 d3r25b2 :   (GLN180)  (HIS328)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Vibrionales bacterium [TaxId: 391574]
 d2hzga2 :   (VAL176)  (GLN317)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 1063]
 d3tjia2 :   (ASP177)  (LEU327)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Enterobacter sp. [TaxId: 399742]
 d2hzgb2 :   (VAL176)  (GLN317)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 1063]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1