Protein Concepts Dictionary

Tableau information

Concept source:  d4e2dd_  amino acid (a.a.) range (GLY171)(HIS351)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY171)  (GLY188) H1
	  (GLY191)  (ALA197) E2
	  (LEU201)  (ARG207) H3
	  (THR222)  (ALA240) H4
	  (ARG245)  (SER251) E5
	  (ASN263)  (SER279) H6
	  (TYR282)  (LEU286) E7
	  (ASP297)  (SER305) H8
	  (VAL309)  (LEU314) E9
	  (ASP317)  (GLY328) H10
	  (ASP331)  (ALA337) E11
	  (LEU345)  (HIS351) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2      146.2°   E2                                                                           
H3     -137.0°  -49.4°   H3                                                                    
H4      -34.4°  162.0° -147.7°   H4                                                             
E5      128.8°  -17.5°  -57.2°  154.0°   E5                                                      
H6      -54.8°  158.9°  120.9°  -28.6°  176.3°   H6                                               
E7      115.7°  -31.7°  -75.0°  136.2°  -17.9°  164.0°   E7                                        
H8      -85.2°  125.8°   83.4°  -66.4°  139.6°  -38.0°  157.2°   H8                                 
E9      102.0°  -47.8°  -92.3°  118.9°  -35.2°  146.7°  -17.4°  172.6°   E9                          
H10    -101.1°  103.6°   57.1°  -91.3°  114.2°  -63.9°  132.1°  -27.0°  149.4°   H10                  
E11      91.2°  -70.0° -119.3°   92.9°  -63.9°  116.9°  -47.5°  147.1°  -32.6°  163.6°   E11           
H12     -73.3°   90.5°   65.9° -102.9°   80.1° -102.1°   85.5°  -92.5°   91.2°  -76.5°  117.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1j2wd_ :    (GLU69)  (VAL211)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Thermus thermophilus [TaxId: 274]
 d3atyb_ :   (GLY171)  (GLN350)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d2hsaa_ :   (GLY156)  (ASN348)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Solanum lycopersicum [TaxId: 4081]
 d3atya_ :   (GLY171)  (ASN342)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4e2ba_ :   (THR164)  (HIS351)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d1n7ka_ :    (SER65)  (GLY215)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Aeropyrum pernix [TaxId: 56636]
 d3atzb_ :   (GLY171)  (GLN351)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d3atzc_ :   (GLY171)  (GLN351)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d3atzd_ :   (GLY171)  (GLN351)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4e2da_ :   (GLY171)  (HIS351)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4e2dd_ :   (GLY171)  (HIS351)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1