Tableau information
Concept source: d3kdoc1 amino acid (a.a.) range (THR7)(GLU135)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: HEHHEEHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR7) (VAL13) H1
(ILE25) (ALA34) E2
(THR38) (SER51) H3
(GLU65) (SER71) H4
(SER71) (ASP79) E5
(GLY83) (PRO92) E6
(PRO92) (GLU97) H7
(LEU101) (GLY110) H8
(MET115) (LYS119) H9
(LYS119) (LEU123) E10
(GLU124) (PRO129) E11
(PRO129) (GLU135) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -132.6° E2
H3 91.4° 133.1° H3
H4 -62.3° -81.8° 114.0° H4
E5 -74.1° -59.5° 147.4° -33.4° E5
E6 76.9° 148.2° -34.7° -128.9° 150.9° E6
H7 -124.3° 91.3° 43.5° -102.2° -123.4° -75.7° H7
H8 -113.3° -26.5° 155.1° -82.5° -51.1° 144.8° 117.1° H8
H9 -72.2° 61.5° -145.8° -31.8° 2.1° -149.0° -123.6° 53.1° H9
E10 37.8° 164.5° -53.6° 82.8° 107.2° -46.6° -90.5° 150.9° 105.1° E10
E11 58.8° -155.8° -53.7° 118.5° 130.6° -21.8° -96.6° 136.2° 129.0° -38.7° E11
H12 -97.9° 104.2° 44.7° -78.1° -107.4° 78.5° 29.4° -129.6° -106.6° -71.0° -93.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3kdoc1 : (THR7) (GLU135) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Thermococcus kodakaraensis [TaxId: 69014]
d3a13c1 : (THR7) (GLU135) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Pyrococcus kodakaraensis [TaxId: 69014]
d3a13b1 : (TYR9) (GLU135) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Pyrococcus kodakaraensis [TaxId: 69014]
d3a12b1 : (THR7) (GLU135) [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Thermococcus kodakaraensis [TaxId: 311400]
d3a13a1 : (TYR9) (GLU135) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Pyrococcus kodakaraensis [TaxId: 69014]
d3a12d1 : (TYR9) (GLU135) [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Thermococcus kodakaraensis [TaxId: 311400]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58