Protein Concepts Dictionary

Tableau information

Concept source:  d4k9ka2  amino acid (a.a.) range (ASP187)(LEU328)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHHEEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP187)  (SER199) H1
	  (ASN202)  (PRO209) E2
	  (PRO209)  (ASN215) H3
	  (ASN217)  (LEU227) H4
	  (PRO230)  (VAL233) E5
	  (PRO238)  (PHE242) E6
	  (GLY256)  (GLU265) H7
	  (ASP268)  (GLY274) E8
	  (GLY292)  (SER297) E9
	  (ASP301)  (ARG307) H10
	  (ASP312)  (ALA316) E11
	  (ASP317)  (LEU328) H12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2     -124.5°   E2                                                                           
H3     -119.4°  -66.5°   H3                                                                    
H4      -49.8° -171.7°  121.0°   H4                                                             
E5      131.7°  -11.1°  -71.7°  166.0°   E5                                                      
E6      -67.2°  134.8°   70.6°  -51.4°  142.1°   E6                                               
H7       71.9°  140.5°   74.2°  -46.8° -145.5°   10.2°   H7                                        
E8     -130.5°  -14.6°   52.0°  172.9°  -20.8°  121.5°  126.2°   E8                                 
E9     -141.2°  -29.2°   40.9°  159.0°  -31.5°  111.3°  114.0°  -15.7°   E9                          
H10      52.8°  137.1° -156.4°  -35.5°  131.3°  -86.6°  -82.2°  151.5° -160.1°   H10                  
E11    -127.6°  -44.5°   22.0°  143.0°  -50.1°   92.0°   96.2°  -30.0°  -20.7° -178.2°   E11           
H12     -56.0° -154.7°  -90.9°   31.0° -162.6°  -20.5°   18.1° -142.0°  131.4°  -66.1°  112.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4jufa2 :   (ASN186)  (LEU328)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
 d4k9ma2 :   (ASP187)  (LEU328)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
 d4k9ka2 :   (ASP187)  (LEU328)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
 d4mq5a2 :   (ASP187)  (LEU328)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
 d1bfda1 :   (ASP187)  (LEU328)   [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.31