Protein Concepts Dictionary

Tableau information

Concept source:  d1n2ta_  amino acid (a.a.) range (ALA202)(ALA363)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA202)  (PRO206) H1
	  (ASP215)  (PHE219) E2
	  (GLY221)  (ALA226) H3
	  (VAL231)  (HIS237) E4
	  (HIS237)  (ASN245) H5
	  (GLU267)  (GLU273) H6
	  (GLN281)  (GLY296) H7
	  (THR297)  (LEU319) H8
	  (HIS321)  (LEU325) E9
	  (GLY333)  (SER341) E10
	  (HIS345)  (GLU354) H11
	  (ILE357)  (ALA363) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2     -113.0°   E2                                                                           
H3      -46.2°   67.5°   H3                                                                    
E4       57.9°  170.8°  103.3°   E4                                                             
H5      163.0°  -83.9°  149.7°  105.2°   H5                                                      
H6      152.3°  -52.2° -111.0°  135.1°   39.3°   H6                                               
H7      -20.7°  101.3°   35.1°  -69.7°  159.8°  131.7°   H7                                        
H8     -103.3°   67.0°   78.8° -112.3°   81.1°   50.8°   83.1°   H8                                 
E9      -80.3° -145.6° -122.7°  -39.0°   86.5°  125.8°  -99.0° -143.4°   E9                          
E10     116.4°   62.8°   88.7° -118.7°   68.8°   38.0°   96.1°   13.1°  141.5°   E10                  
H11      82.0°  -49.0°   55.9°  126.3° -112.1°  -97.2°   85.1°  110.5° -106.1°  110.3°   H11           
E12    -107.2°  133.2° -140.2°  -54.1°   56.8°   81.1° -108.5°  -81.5°   63.1°  -78.6° -163.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1n2ta_ :   (ALA202)  (ALA363)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystine C-S lyase C-des |Synechocystis sp. [TaxId: 1143]
 d1c0na_ :   (ASP211)  (HIS362)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |NifS-like protein/selenocysteine lyase |Escherichia coli [TaxId: 562]
 d1i29a_ :   (ASP211)  (GLY361)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |NifS-like protein/selenocysteine lyase |Escherichia coli [TaxId: 562]
 d1elqa_ :   (ALA202)  (ASP364)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystine C-S lyase C-des |Synechocystis sp. [TaxId: 1143]
 d1n31a_ :   (ALA202)  (ALA363)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystine C-S lyase C-des |Synechocystis sp. [TaxId: 1143]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67