Protein Concepts Dictionary

Tableau information

Concept source:  d1kdva_  amino acid (a.a.) range (GLU12)(SER167)

nSSEs in this Concept: 12

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU12)   (ASP18) H1
	   (THR28)   (THR34) E2
	   (VAL38)   (GLY53) H3
	   (ASN58)   (GLN63) E4
	   (ASP74)   (ASP84) H5
	   (SER85)   (GLY93) H6
	   (GLN98)  (ALA104) E7
	  (THR112)  (ASN125) H8
	  (LYS128)  (CYS137) E9
	  (ALA139)  (GLY145) H10
	  (GLY145)  (GLY161) H11
	  (GLN162)  (SER167) E12

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                  
E2      112.3°   E2                                                                           
H3      -72.8°  137.2°   H3                                                                    
E4       99.5°  -37.8°  169.0°   E4                                                             
H5      -48.3°  157.2°  -36.1°  142.1°   H5                                                      
H6      -54.6°  159.4°  -30.2°  148.9°   -7.0°   H6                                               
E7      100.9°  -23.6°  156.2°  -15.3°  148.5°  155.3°   E7                                        
H8      -72.3°  168.2°  -54.1°  132.1°  -32.6°  -31.8°  147.2°   H8                                 
E9       90.9°  -22.8°  125.1°  -45.7°  134.5°  137.8°  -31.0° -162.8°   E9                          
H10    -106.2°   82.0° -139.4°   49.8° -112.9° -115.7°   64.3°  -86.3°   95.3°   H10                  
H11     -73.4°  173.4°  -39.9°  146.6°  -26.8°  -22.9°  161.5°   14.5° -160.6°  -99.9°   H11           
E12      94.5°  -46.7°   91.3°  -81.2°  115.9°  114.6°  -65.9°  145.0°  -36.9°  128.7° -131.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ga1a_ :     (ASN9)  (SER167)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]
 d1ga4a_ :    (GLU12)  (SER167)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]
 d1kdza_ :    (GLU12)  (SER167)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]
 d1kdva_ :    (GLU12)  (SER167)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.41