Tableau information
Concept source: d2dy4a1 amino acid (a.a.) range (PRO179)(HIS317)
nSSEs in this Concept: 12
String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO179) (LYS185) H1
(ILE187) (ASP192) E2
(ASN193) (LYS208) H3
(VAL211) (TRP216) E4
(ASN217) (ILE233) H5
(GLU236) (SER243) H6
(ARG246) (MSE256) E7
(GLY258) (GLY267) E8
(GLY267) (TYR273) E9
(TYR273) (LYS279) H10
(SER289) (ASN299) H11
(PRO308) (HIS317) H12
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -64.0° E2
H3 92.6° 148.6° H3
E4 -137.1° -75.3° 130.3° E4
H5 -26.1° 40.1° -118.8° 110.9° H5
H6 119.0° -176.7° 34.4° 101.4° 142.5° H6
E7 -149.8° -90.2° 104.0° -33.8° -130.3° 87.2° E7
E8 53.7° 116.2° -51.7° 152.0° 76.1° -66.5° 153.4° E8
E9 -158.1° -100.2° 107.2° -25.0° 133.3° 76.5° -33.9° 133.8° E9
H10 143.1° -133.6° 55.9° -76.5° -161.0° -44.9° 48.3° -105.9° -58.8° H10
H11 121.6° -159.2° 51.0° -92.2° -138.1° 18.7° 88.2° -68.3° 67.9° 55.9° H11
H12 -65.3° -92.2° 96.6° 104.9° -66.0° 88.2° 135.4° 51.8° 102.2° 130.5° 74.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1clqa1 : (PRO179) (LEU312) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d2dtua1 : (PRO179) (HIS317) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d1noya_ : (GLN177) (HIS314) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage T4 [TaxId: 10665]
d4khua1 : (SER163) (HIS317) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d1q9ya1 : (SER166) (LEU315) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d1ig9a1 : (PRO179) (HIS317) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d2dy4a1 : (PRO179) (HIS317) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.55